RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DCLK1O15075 740 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 RAB14P61106 215 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 BOP1Q14137 746 aaKnown RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 PTK2BQ14289 1009 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 FASTKQ14296 549 aaKnown RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 AGKQ53H12 422 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 TRMT11Q7Z4G4 463 aaKnown RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 OR10T2Q8NGX3 314 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 ARL15Q9NXU5 204 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 PRAMEF11O60813 436 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 RB1P06400 928 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 PRKCHP24723 683 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 ADSLP30566 484 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 SERPINB10P48595 397 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 NRG1Q02297 640 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 NFYCQ13952 458 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 DPYSQ14117 519 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 GPR33Q49SQ1 333 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 GRIN3AQ8TCU5 1115 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 OTUB1Q96FW1 271 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-201ENST00000350148 OMDQ99983 421 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 CROTQ9UKG9 612 aa12.16□□□□□ -0.46
SMAD9-201ENST00000350148 HCRTO43612 131 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 FGFR3P22607 806 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 GPR1P46091 355 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 IL1RL1Q01638 556 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 RAB33AQ14088 237 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 ZFP1Q6P2D0 407 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 HDDC2Q7Z4H3 204 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 PCDH20Q8N6Y1 951 aaKnown RBP12.15□□□□□ -0.46
SMAD9-201ENST00000350148 DCAF4L2Q8NA75 395 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 ELMO1Q92556 727 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 DPY30Q9C005 99 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 ZDHHC4Q9NPG8 344 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 DNAJC28Q9NX36 388 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 NUDT4Q9NZJ9 180 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 DNAJB4Q9UDY4 337 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 TIMP1P01033 207 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 HLA-DQB2P05538 268 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
SMAD9-201ENST00000350148 PSMA4P25789 261 aaKnown RBP12.15□□□□□ -0.46
SMAD9-201ENST00000350148 MED21Q13503 144 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 CELF5Q8N6W0 485 aaKnown RBP12.15□□□□□ -0.46
SMAD9-201ENST00000350148 LRRN4Q8WUT4 740 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 ACOX2Q99424 681 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 SHCBP1LQ9BZQ2 653 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 CCSER2Q9H7U1 834 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 CSNK1G1Q9HCP0 422 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 UNC5CO95185 931 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 ACADSP16219 412 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 EPB42P16452 691 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 SLC26A3P40879 764 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 RCN1Q15293 331 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 CDH24Q86UP0 819 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 SPATA22Q8NHS9 363 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 SLC22A17Q8WUG5 538 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 FAM162AQ96A26 154 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 CACNG4Q9UBN1 327 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 CARD8Q9Y2G2 431 aa12.15□□□□□ -0.46
SMAD9-201ENST00000350148 FAM189A1O60320 539 aa12.15□□□□□ -0.47
SMAD9-201ENST00000350148 ELFN1P0C7U0 828 aa12.15□□□□□ -0.47
SMAD9-201ENST00000350148 RPL3P39023 403 aaKnown RBP12.15□□□□□ -0.47
SMAD9-201ENST00000350148 PTPN5P54829 565 aa12.15□□□□□ -0.47
SMAD9-201ENST00000350148 SIX1Q15475 284 aaPredicted RBP12.15□□□□□ -0.47
SMAD9-201ENST00000350148 TRPV1Q8NER1 839 aa12.15□□□□□ -0.47
SMAD9-201ENST00000350148 RP9Q8TA86 221 aaKnown RBP12.15□□□□□ -0.47
SMAD9-201ENST00000350148 ZFYVE19Q96K21 471 aa12.15□□□□□ -0.47
SMAD9-201ENST00000350148 EXOC2Q96KP1 924 aa12.15□□□□□ -0.47
SMAD9-201ENST00000350148 MGAT4DA6NG13 374 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 NPHS1O60500 1241 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 PLIN3O60664 434 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 CPA2P48052 419 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 PLK1P53350 603 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
SMAD9-201ENST00000350148 PFKFB4Q16877 469 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 GALNTL6Q49A17 601 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 SH3RF2Q8TEC5 729 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 EVLQ9UI08 416 aaPredicted RBP12.14□□□□□ -0.47
SMAD9-201ENST00000350148 ZMYND8Q9ULU4 1186 aaPredicted RBP12.14□□□□□ -0.47
SMAD9-201ENST00000350148 IFNA14P01570 189 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
SMAD9-201ENST00000350148 KELP23276 732 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 PBLDP30039 288 aaPredicted RBP12.14□□□□□ -0.47
SMAD9-201ENST00000350148 CNTN1Q12860 1018 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 CARD16Q5EG05 197 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 KLHDC10Q6PID8 442 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 ZCCHC23Q6ZST2 131 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 VPS51Q9UID3 782 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 NMBRP28336 390 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 RXRGP48443 463 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 DGKGP49619 791 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 MGAT3Q09327 533 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 TP53BP2Q13625 1128 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 CLLU1OSQ5K130 101 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 SAMD4BQ5PRF9 694 aaKnown RBP12.14□□□□□ -0.47
SMAD9-201ENST00000350148 GPRIN3Q6ZVF9 776 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 C10orf107Q8IVU9 208 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 DLG3Q92796 817 aa12.14□□□□□ -0.47
SMAD9-201ENST00000350148 KIFC1Q9BW19 673 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms