RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ACCSLQ4AC99 568 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 FRMD7Q6ZUT3 714 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 HTR3DQ70Z44 454 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 CPXM2Q8N436 756 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 TTC30BQ8N4P2 665 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 RHEBL1Q8TAI7 183 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 LPGAT1Q92604 370 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 PAWRQ96IZ0 340 aaKnown RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 MAELQ96JY0 434 aaKnown RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 TFB2MQ9H5Q4 396 aaKnown RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 ZNF385DQ9H6B1 395 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 TAS2R13Q9NYV9 303 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 STOML1Q9UBI4 398 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 VPS51Q9UID3 782 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 A0A088AWK7 358 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 UBA6A0AVT1 1052 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 RGSL1A5PLK6 1076 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 MEI4A8MW99 385 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 H0Y3Z8 333 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 STX7O15400 261 aaKnown RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 TGM5O43548 720 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 FGF18O76093 207 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 RHOBTB1O94844 696 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 LRG1P02750 347 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 CNPP09543 421 aaKnown RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 SPATA31D3P0C874 917 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 HNRNPLP14866 589 aaKnown RBP eCLIP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 RAG1P15918 1043 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 ZNF37AP17032 561 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 ITGB8P26012 769 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 PIK3R1P27986 724 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 GCKP35557 465 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 ABL2P42684 1182 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 AP1S1P61966 158 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 ZXDBP98169 803 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 PDCD2Q16342 344 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 NXNQ6DKJ4 435 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 RETSATQ6NUM9 610 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 SPATA31D4Q6ZUB0 917 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 CCDC149Q6ZUS6 474 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 CEP70Q8NHQ1 597 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 RP9Q8TA86 221 aaKnown RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 ACTRT2Q8TDY3 377 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 OSBPL1AQ9BXW6 950 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 MRGBPQ9NV56 204 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 SLC7A8Q9UHI5 535 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 SH3BP1Q9Y3L3 701 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 KIAA1671Q9BY89 1806 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 LOC100653049A0A140TA62 436 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 H7C0S8 307 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 FZD6O60353 706 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 KRT34O76011 436 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 SRP72O76094 671 aaKnown RBP16.66■□□□□ 0.26
SAMM50-201ENST00000350028 PFKLP17858 780 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 FMO4P31512 558 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 PPARGP37231 505 aaPredicted RBP16.66■□□□□ 0.26
SAMM50-201ENST00000350028 KCNC1P48547 511 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 TTPAP49638 278 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 CYP4F8P98187 520 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 SULT2A1Q06520 285 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 CUL3Q13618 768 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 HERC3Q15034 1050 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 ZNF678Q5SXM1 525 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 MPP7Q5T2T1 576 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 GAREM2Q75VX8 874 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 RAB44Q7Z6P3 723 aaPredicted RBP16.66■□□□□ 0.26
SAMM50-201ENST00000350028 CUZD1Q86UP6 607 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 MFN1Q8IWA4 741 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.66■□□□□ 0.26
SAMM50-201ENST00000350028 EFHBQ8N7U6 833 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 SH3RF2Q8TEC5 729 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 PTERQ96BW5 349 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 PHF21BQ96EK2 531 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 PPP1R36Q96LQ0 422 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 LENG8Q96PV6 779 aaPredicted RBP16.66■□□□□ 0.26
SAMM50-201ENST00000350028 ASB2Q96Q27 587 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 TACO1Q9BSH4 297 aaKnown RBP16.66■□□□□ 0.26
SAMM50-201ENST00000350028 C2orf49Q9BVC5 232 aaPredicted RBP16.66■□□□□ 0.26
SAMM50-201ENST00000350028 LRRC3Q9BY71 257 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 GSTO2Q9H4Y5 243 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 PCDH10Q9P2E7 1040 aa16.66■□□□□ 0.26
SAMM50-201ENST00000350028 SDHDO14521 159 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CCNT2O60583 730 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 PYGLP06737 847 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 PRSS56P0CW18 603 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 EN2P19622 333 aaPredicted RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ITGAXP20702 1163 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CD9P21926 228 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 MC4RP32245 332 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CA8P35219 290 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ACTR3P61158 418 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ATP6V0D1P61421 351 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 RCN1Q15293 331 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CCDC6Q16204 474 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 MPPE1Q53F39 396 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 AARS2Q5JTZ9 985 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 PGM2L1Q6PCE3 622 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 LILRA6Q6PI73 481 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms