RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 RAB3IL1Q8TBN0 382 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 NXPE3Q969Y0 559 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 LRIG1Q96JA1 1093 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 NDNQ99608 321 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 OSBPL1AQ9BXW6 950 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 VPS9D1Q9Y2B5 631 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 VWA7Q9Y334 891 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 MTCH2Q9Y6C9 303 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 SCN8AQ9UQD0 1980 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 ZNF106Q9H2Y7 1883 aaKnown RBP21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 PRRT4C9JH25 899 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 KLF11O14901 512 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 ECI2O75521 394 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 APOA4P06727 396 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 SP100P23497 879 aaPredicted RBP21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 DMTNQ08495 405 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 PEX6Q13608 980 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 AARS2Q5JTZ9 985 aaKnown RBP21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 RNF187Q5TA31 235 aaPredicted RBP21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 BRAT1Q6PJG6 821 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 PARM1Q6UWI2 310 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 CCDC91Q7Z6B0 441 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 EID2BQ96D98 161 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 SEC16BQ96JE7 1060 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 MSLNLQ96KJ4 702 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 KLHL32Q96NJ5 620 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 MCCC1Q96RQ3 725 aaPredicted RBP21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 ELAC2Q9BQ52 826 aaKnown RBP21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 C1QTNF1Q9BXJ1 281 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 POMKQ9H5K3 350 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 SIRPGQ9P1W8 387 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 IL36AQ9UHA7 158 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 CRYL1Q9Y2S2 319 aa21.44■■□□□ 1.02
TSPAN3-202ENST00000346495 A0A0U1RQS6 177 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 EDF1O60869 148 aaKnown RBP21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 NDUFS3O75489 264 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 CLDN7O95471 211 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 BMP1P13497 986 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 BGNP21810 368 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 GJA4P35212 333 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 GMPRP36959 345 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 TTPAP49638 278 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 IRX4P78413 519 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 XIAPP98170 497 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 ZRANB3Q5FWF4 1079 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 FAM47EQ6ZV65 393 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 CACNA2D3Q8IZS8 1091 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 PHTF2Q8N3S3 785 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 TERB1Q8NA31 727 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 TTC8Q8TAM2 541 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 GRIN3AQ8TCU5 1115 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 NECTIN4Q96NY8 510 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 ZNF358Q9NW07 568 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 MID2Q9UJV3 735 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 SLC30A1Q9Y6M5 507 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 WASF2Q9Y6W5 498 aa21.43■■□□□ 1.02
TSPAN3-202ENST00000346495 TMEM265A0A087WTH1 108 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 NPIPB15A6NHN6 443 aaPredicted RBP21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 EBAG9O00559 213 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 GDI1P31150 447 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 LTBRP36941 435 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 OPRD1P41143 372 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 EIF2DP41214 584 aaKnown RBP21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 CACNG1Q06432 222 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 MESP2Q0VG99 397 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 TSNAXIP1Q2TAA8 658 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 PREPLQ4J6C6 727 aaPredicted RBP21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 FNDC3BQ53EP0 1204 aaKnown RBP21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 ATG16L1Q676U5 607 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 CRTC1Q6UUV9 634 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 MTSS1LQ765P7 747 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 PNPLA1Q8N8W4 532 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 UCMAQ8WVF2 138 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 FGF14Q92915 247 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 OLFM1Q99784 485 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 MECRQ9BV79 373 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 BRD9Q9H8M2 597 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 NMRAL1Q9HBL8 299 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 APPL1Q9UKG1 709 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 STARD13Q9Y3M8 1113 aa21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 MUC22E2RYF6 1773 aaPredicted RBP21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 RANBP2P49792 3224 aaKnown RBP21.42■■□□□ 1.02
TSPAN3-202ENST00000346495 TSPAN11A1L157 253 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 SNX3O60493 162 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 LEFTY1O75610 366 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 PRSS56P0CW18 603 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 POU3F3P20264 500 aaPredicted RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 NFKBIAP25963 317 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 KPNA2P52292 529 aaKnown RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 PTPN5P54829 565 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 ZNF460Q14592 562 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 COL19A1Q14993 1142 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 LRIT3Q3SXY7 679 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 ARSIQ5FYB1 569 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 TBC1D1Q86TI0 1168 aaPredicted RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 CBARPQ8N350 705 aaPredicted RBP21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 CCDC197Q8NCU1 140 aa21.41■■□□□ 1.02
TSPAN3-202ENST00000346495 HCAR2Q8TDS4 363 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms