RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PYGLP06737 847 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 ABCB1P08183 1280 aaPredicted RBP13.3□□□□□ -0.28
CASC4-202ENST00000345795 ATP5F1P24539 256 aaPredicted RBP13.3□□□□□ -0.28
CASC4-202ENST00000345795 ARRB2P32121 409 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 HNF4AP41235 474 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 HSPA7P48741 367 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 SLC7A2P52569 658 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 NFYCQ13952 458 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 YIPF1Q9Y548 306 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
CASC4-202ENST00000345795 PREPLQ4J6C6 727 aaPredicted RBP13.3□□□□□ -0.28
CASC4-202ENST00000345795 MBOAT1Q6ZNC8 495 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 ADCK2Q7Z695 626 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 PARP8Q8N3A8 854 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 CNDP1Q96KN2 507 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 C7orf26Q96N11 449 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 ADGRE3Q9BY15 652 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
CASC4-202ENST00000345795 USP3Q9Y6I4 520 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 SRRM3A6NNA2 597 aaPredicted RBP13.3□□□□□ -0.28
CASC4-202ENST00000345795 CABYRO75952 493 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 CLDN7O95471 211 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 SEC24AO95486 1093 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 ANPEPP15144 967 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 ITPKAP23677 461 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 CTNNB1P35222 781 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 CCDC15Q0P6D6 951 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 MED21Q13503 144 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 RPAINQ86UA6 219 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 DSELQ8IZU8 1212 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 FEM1CQ96JP0 617 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 PPM1MQ96MI6 270 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 UROC1Q96N76 676 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 ZNF570Q96NI8 536 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 PANX3Q96QZ0 392 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 FCRL5Q96RD9 977 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 EURLQ9NYK6 297 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 SIRPGQ9P1W8 387 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 RAP2CQ9Y3L5 183 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 SPO11Q9Y5K1 396 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 INPPL1O15357 1258 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 ZNF623O75123 536 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 E2F6O75461 281 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 IPO13O94829 963 aaKnown RBP13.29□□□□□ -0.28
CASC4-202ENST00000345795 XRCC1P18887 633 aaPredicted RBP13.29□□□□□ -0.28
CASC4-202ENST00000345795 CRABP2P29373 138 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
CASC4-202ENST00000345795 TAZQ16635 292 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 TNFAIP8L3Q5GJ75 292 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 RNF220Q5VTB9 566 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 ARCQ7LC44 396 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 ANKRD46Q86W74 232 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 GPSM1Q86YR5 675 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 INPP5DQ92835 1189 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 DCUN1D1Q96GG9 259 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 VPS50Q96JG6 964 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 WRAP53Q9BUR4 548 aaKnown RBP13.29□□□□□ -0.28
CASC4-202ENST00000345795 SPATA16Q9BXB7 569 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 ACTR8Q9H981 624 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 SMAD6O43541 496 aaKnown RBP13.29□□□□□ -0.28
CASC4-202ENST00000345795 PRAMEF1O95521 474 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 RBP1P09455 135 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 NNMTP40261 264 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 THOP1P52888 689 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 DLG1Q12959 904 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 STARD3Q14849 445 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 TRIP4Q15650 581 aaPredicted RBP13.29□□□□□ -0.28
CASC4-202ENST00000345795 OR6Y1Q8NGX8 325 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 DTNAQ9Y4J8 743 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 A8MT66 165 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 PIP5K1BO14986 540 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 EOMESO95936 686 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 PSAPL1Q6NUJ1 521 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 TMEM135Q86UB9 458 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 BCL7CQ8WUZ0 217 aaPredicted RBP13.29□□□□□ -0.28
CASC4-202ENST00000345795 CDKN2AIPNLQ96HQ2 116 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 CCDC90BQ9GZT6 254 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 SLCO3A1Q9UIG8 710 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 CDH22Q9UJ99 828 aa13.29□□□□□ -0.28
CASC4-202ENST00000345795 OR6C75A6NL08 312 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 OAS1P00973 400 aaKnown RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 C8AP07357 584 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 ATF6P18850 670 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 HALP42357 657 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 HMGCS1Q01581 520 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 ABRQ12979 859 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 PGS1Q32NB8 556 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 ZIK1Q3SY52 487 aaPredicted RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 PNPT1Q8TCS8 783 aaKnown RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 NMD3Q96D46 503 aaKnown RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 NSMCE4AQ9NXX6 385 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 PCDHB12Q9Y5F1 795 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 OR4F21O95013 312 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 NTRK1P04629 796 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 CCL5P13501 91 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 DSG1Q02413 1049 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 ANKS6Q68DC2 871 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms