RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GVINP1Q7Z2Y8 2422 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 ZNF292O60281 2723 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 TLR4O00206 839 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 NDC80O14777 642 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 CLDN7O95471 211 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 ATXN1LP0C7T5 689 aaKnown RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 ZSCAN5DPP0CG00 497 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 ETS1P14921 441 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 HTR1BP28222 390 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 ADRA1AP35348 466 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 HMGCLP35914 325 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 ADCY8P40145 1251 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 RABIFP47224 123 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 THOP1P52888 689 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 YPEL5P62699 121 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 DR1Q01658 176 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 PTSQ03393 145 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 DHX34Q14147 1143 aaKnown RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 PTK2BQ14289 1009 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 WHAMMP3Q1A5X7 153 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 FAXCQ5TGI0 409 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 KCTD11Q693B1 232 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 TTC27Q6P3X3 843 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 ASCL5Q7RTU5 278 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 GLT6D1Q7Z4J2 308 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 PCGF5Q86SE9 256 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 NLRP8Q86W28 1048 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 KLHL7Q8IXQ5 586 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 CBARPQ8N350 705 aaPredicted RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 TAB3Q8N5C8 712 aaPredicted RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 TMEM145Q8NBT3 493 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 BLOC1S5Q8TDH9 187 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 SLCO2A1Q92959 643 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 CENPTQ96BT3 561 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 DTD2Q96FN9 168 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 COQ10AQ96MF6 247 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 SLC6A18Q96N87 628 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 DDX47Q9H0S4 455 aaKnown RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 EIF2B3Q9NR50 452 aaKnown RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 SHOC2Q9UQ13 582 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 PKP3Q9Y446 797 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 ZNF711Q9Y462 761 aa11.83□□□□□ -0.52
SNCA-202ENST00000345009 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
SNCA-202ENST00000345009 CABIN1Q9Y6J0 2220 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 MYO15AQ9UKN7 3530 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 SUN1O94901 812 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 LHCGRP22888 699 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 KELP23276 732 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 PLA2G5P39877 138 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 ETV3P41162 512 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 CHRNA4P43681 627 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 VPS41P49754 854 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 STC1P52823 247 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 DPTQ07507 201 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 CDH17Q12864 832 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 MTM1Q13496 603 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 FGL2Q14314 439 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 SPARCL1Q14515 664 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 TRIP13Q15645 432 aaPredicted RBP11.82□□□□□ -0.52
SNCA-202ENST00000345009 KYAT3Q6YP21 454 aaKnown RBP11.82□□□□□ -0.52
SNCA-202ENST00000345009 Q6ZSR6 202 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 Q6ZVL8 140 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 ZNF765Q7L2R6 523 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 LYSMD3Q7Z3D4 306 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 HSD11B1LQ7Z5J1 315 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 TMC3Q7Z5M5 1100 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 PTAR1Q7Z6K3 402 aaPredicted RBP11.82□□□□□ -0.52
SNCA-202ENST00000345009 ABI3BPQ7Z7G0 1075 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 TSPAN33Q86UF1 283 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 OXR1Q8N573 874 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 SPATA4Q8NEY3 305 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 BRSK1Q8TDC3 778 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 AP2M1Q96CW1 435 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 KLF6Q99612 283 aaPredicted RBP11.82□□□□□ -0.52
SNCA-202ENST00000345009 MYOCQ99972 504 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 APOL2Q9BQE5 337 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 ORAI3Q9BRQ5 295 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 FAM83DQ9H4H8 585 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 EBF2Q9HAK2 575 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 CAPN10Q9HC96 672 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 GDF3Q9NR23 364 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 ASIC3Q9UHC3 531 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 ANKRD6Q9Y2G4 727 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 COQ6Q9Y2Z9 468 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 LAMA1P25391 3075 aa11.82□□□□□ -0.52
SNCA-202ENST00000345009 A0A1B0GVT2 93 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 CACNB4O00305 520 aaPredicted RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 FANCGO15287 622 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 STX7O15400 261 aaKnown RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 USP12O75317 370 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 CER1O95813 267 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 SLC4A1P02730 911 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 PIRTP0C851 137 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 THEGLP0DJG4 465 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 TSHRP16473 764 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 TPSB2P20231 275 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 LPOP22079 712 aaPredicted RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 TEAD1P28347 426 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms