RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 FSHRP23945 695 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 HMGCLP35914 325 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 CLCN5P51795 746 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 PTPRNQ16849 979 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 RALGPS1Q5JS13 557 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 FAM219BQ5XKK7 198 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 FRS2Q8WU20 508 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 LPGAT1Q92604 370 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 UBXN10Q96LJ8 280 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 C7orf26Q96N11 449 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 GPR63Q9BZJ6 419 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 ZDHHC6Q9H6R6 413 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 GPAMQ9HCL2 828 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 ERVW-1Q9UQF0 538 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 UBA6A0AVT1 1052 aaPredicted RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 PRRT4C9JH25 899 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 TULP3O75386 442 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 KLHL2O95198 593 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 UGT2B4P06133 528 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 RALBP11234 206 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ADH5P11766 374 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 KCNA5P22460 613 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 CRABP2P29373 138 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 FMO4P31512 558 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 SNRPD1P62314 119 aaKnown RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 DLX2Q07687 328 aaPredicted RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 TAF1BQ53T94 588 aaPredicted RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 CARD16Q5EG05 197 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 LRRC8EQ6NSJ5 796 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 MRNIPQ6NTE8 343 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 YTHDF3Q7Z739 585 aaKnown RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 GRIN3AQ8TCU5 1115 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 BPIFB1Q8TDL5 484 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 NXPE3Q969Y0 559 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ECHDC3Q96DC8 303 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 OTUB2Q96DC9 234 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 SCYL1Q96KG9 808 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 BIRC8Q96P09 236 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 SLC30A3Q99726 388 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 CIPCQ9C0C6 399 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ATP13A3Q9H7F0 1226 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 MSRAQ9UJ68 235 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 C1orf232A0A0U1RR37 186 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 HEPACAM2A8MVW5 462 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 DLX3O60479 287 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 LHCGRP22888 699 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 PMLP29590 882 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 SLC1A6P48664 564 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ZRANB3Q5FWF4 1079 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ATG16L1Q676U5 607 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 AFTPHQ6ULP2 937 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 GPR149Q86SP6 731 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDC42-202ENST00000344548 SMARCD2Q92925 531 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ISG20Q96AZ6 181 aaKnown RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 GATA5Q9BWX5 397 aaPredicted RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 PLA2G2FQ9BZM2 168 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 SUV39H2Q9H5I1 410 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ZDHHC4Q9NPG8 344 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.55□□□□□ -0.24
CDC42-202ENST00000344548 SLC25A13Q9UJS0 675 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 FAM50BQ9Y247 325 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 ANKRD6Q9Y2G4 727 aa13.55□□□□□ -0.24
CDC42-202ENST00000344548 SOCS5O75159 536 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 IL1BP01584 269 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 CTSLP07711 333 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 MYL2P10916 166 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 UGT1A6P19224 532 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 OGNP20774 298 aaKnown RBP13.54□□□□□ -0.24
CDC42-202ENST00000344548 UGT1A1P22309 533 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 UGT1A4P22310 534 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 FDXRP22570 491 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 SERPINA4P29622 427 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 UGT1A3P35503 534 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 UGT1A5P35504 534 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 SLC12A2P55011 1212 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 CRTC1Q6UUV9 634 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 CCDC121Q6ZUS5 278 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 ETFBKMTQ8IXQ9 262 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 LMNTD2Q8IXW0 634 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 PAF1Q8N7H5 531 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 PPP1R14CQ8TAE6 165 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 MRPL38Q96DV4 380 aaKnown RBP13.54□□□□□ -0.24
CDC42-202ENST00000344548 FAM83CQ9BQN1 747 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 AARSD1Q9BTE6 412 aaKnown RBP13.54□□□□□ -0.24
CDC42-202ENST00000344548 TMEM120AQ9BXJ8 343 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 ZFYVE1Q9HBF4 777 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 HPS4Q9NQG7 708 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 PNPOQ9NVS9 261 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 OXSMQ9NWU1 459 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 553.3 ms