RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TM9SF3Q9HD45 589 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 ERVW-1Q9UQF0 538 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 CPQQ9Y646 472 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 DGKBQ9Y6T7 804 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 hCG_1642624A0A1W2PR95 340 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 TCRBV21S2A2A0A5A6 115 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 BTBD18B2RXH4 712 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 SGK1O00141 431 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 HNRNPDLO14979 420 aaKnown RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 DAPK3O43293 454 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 COCHO43405 550 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 INMTO95050 263 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 FUCA1P04066 466 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 WEE2P0C1S8 567 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 RBP3P10745 1247 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 KRT4P19013 534 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 CDH5P33151 784 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 PCYT1AP49585 367 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 CDR2Q01850 454 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 RAPGEF1Q13905 1077 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 TAF12Q16514 161 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 DCAF12L1Q5VU92 463 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 DENND2CQ68D51 928 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 NET1Q7Z628 596 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 LZTR1Q8N653 840 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 OR8K5Q8NH50 307 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 PAGE5Q96GU1 130 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 ELOVL2Q9NXB9 296 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 IP6K2Q9UHH9 426 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 CEP290O15078 2479 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 FAM221AA4D161 298 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 CCDC188H7C350 402 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 RBAK-RBAKDNI3L0D1 243 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 K7ENM7 598 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 PSMD11O00231 422 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 BUD23O43709 281 aaKnown RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 IDH3BO43837 385 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 LRRN2O75325 713 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ENDOD1O94919 500 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ONECUT2O95948 504 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 DLDP09622 509 aaKnown RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 OCM2P0CE71 109 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 OCMP0CE72 109 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 UQCRBP14927 111 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 CDH3P22223 829 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 CDH8P55286 799 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 IRX4P78413 519 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 TLE3Q04726 772 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ASPHQ12797 758 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 PAK1Q13153 545 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 MED21Q13503 144 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 MGAT5BQ3V5L5 792 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 WSCD1Q658N2 575 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 PCSK4Q6UW60 755 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 LHFPL2Q6ZUX7 228 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ZNF765Q7L2R6 523 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ADGRG6Q86SQ4 1221 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 PRPF39Q86UA1 669 aaKnown RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 CDK5RAP3Q96JB5 506 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 C1QTNF7Q9BXJ2 289 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 MRPS26Q9BYN8 205 aaKnown RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 SYTL2Q9HCH5 934 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 GJB4Q9NTQ9 266 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ANKRD6Q9Y2G4 727 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 HES2Q9Y543 173 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 WASF2Q9Y6W5 498 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 DRGXA6NNA5 263 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 AKAP10O43572 662 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 CCDC22O60826 627 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ANPEPP15144 967 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 PTGER4P35408 488 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 SOX8P57073 446 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 AUHQ13825 339 aaKnown RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 RASA2Q15283 850 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 NADK2Q4G0N4 442 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ADGRF1Q5T601 910 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 AGAP9Q5VTM2 703 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 CCDC81Q6ZN84 652 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 PAQR9Q6ZVX9 377 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 RFPL4BQ6ZWI9 263 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ACBD4Q8NC06 268 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 CHPT1Q8WUD6 406 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ZFPM2Q8WW38 1151 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 SLC39A7Q92504 469 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 SDCCAG3Q96C92 435 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 MRGPRX3Q96LB0 322 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 SERPINB11Q96P15 392 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 LPIN3Q9BQK8 851 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 GPATCH1Q9BRR8 931 aaKnown RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 BTBD10Q9BSF8 475 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 SMG9Q9H0W8 520 aaKnown RBP7.35□□□□□ -1.23
ZNF540-202ENST00000343599 EHD1Q9H4M9 534 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 C12orf10Q9HB07 376 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 TMEM8AQ9HCN3 771 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ZDHHC18Q9NUE0 388 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ARHGAP20Q9P2F6 1191 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 AMACRQ9UHK6 382 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 ERVK-11Q9UQG0 969 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 DNAJC16Q9Y2G8 782 aa7.35□□□□□ -1.23
ZNF540-202ENST00000343599 PCSK5Q92824 1860 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms