RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 AP4S1Q9Y587 144 aa16.96■□□□□ 0.31
CDK11B-201ENST00000340677 MCM3APO60318 1980 aa16.96■□□□□ 0.31
CDK11B-201ENST00000340677 A0A0A6YYJ9 748 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 B2RBV5 119 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 SLCO1B7G3V0H7 640 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 PITPNM1O00562 1244 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 TP73O15350 636 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 RAB3AP20336 220 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 CPA2P48052 419 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 ERVFC1P60507 584 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 GPR107Q5VW38 600 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 CYB5R2Q6BCY4 276 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 LIN54Q6MZP7 749 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.3
CDK11B-201ENST00000340677 MSANTD3Q96H12 275 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 ASB2Q96Q27 587 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 GDF15Q99988 308 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 BCL7BQ9BQE9 202 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 C6orf62Q9GZU0 229 aaPredicted RBP16.96■□□□□ 0.3
CDK11B-201ENST00000340677 CXorf21Q9HAI6 301 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 GLRX2Q9NS18 164 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 NR2E1Q9Y466 385 aa16.96■□□□□ 0.3
CDK11B-201ENST00000340677 IGSF9BQ9UPX0 1349 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 ASB14A6NK59 587 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 TARM1B6A8C7 271 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 CDC123O75794 336 aaPredicted RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 FTCDO95954 541 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 KRT1P04264 644 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 ACAA1P09110 424 aaPredicted RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 TIMP2P16035 220 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 YWHABP31946 246 aaKnown RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 FNTBP49356 437 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 FKBP3Q00688 224 aaKnown RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 NME3Q13232 169 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 KCNAB2Q13303 367 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 PLEKHG4Q58EX7 1191 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 LRRC55Q6ZSA7 311 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 OR4M2Q8NGB6 313 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 TCP10LQ8TDR4 215 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 HTRA1Q92743 480 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 CD101Q93033 1021 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 PTP4A1Q93096 173 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 ERGIC2Q96RQ1 377 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 RBM15Q96T37 977 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 TRIM31Q9BZY9 425 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 KANSL3Q9P2N6 904 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 PACSIN2Q9UNF0 486 aaPredicted RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 GNEQ9Y223 722 aaKnown RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 MANSC4A6NHS7 340 aaPredicted RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 H0Y626 953 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 UBXN8O00124 270 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 PDXKO00764 312 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 PEX10O60683 326 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 KCNK2O95069 426 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 NFICP08651 508 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 CYP11B1P15538 503 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 GRIA3P42263 894 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 LEPRP48357 1165 aaKnown RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 CDH15P55291 814 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 ACTR2P61160 394 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 FASTKD3Q14CZ7 662 aaKnown RBP16.95■□□□□ 0.3
CDK11B-201ENST00000340677 GEN1Q17RS7 908 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 BRAT1Q6PJG6 821 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 TMEM26Q6ZUK4 368 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 LRGUKQ96M69 825 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 COPS4Q9BT78 406 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 ZDHHC18Q9NUE0 388 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
CDK11B-201ENST00000340677 SYNGAP1Q96PV0 1343 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 TRBV23-1A0A0A0MS06 115 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 TTLL8A6PVC2 850 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 I3L521 148 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SUPT20HL2P0C7V6 817 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 ARPP19P56211 112 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 BNIP2Q12982 314 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 MAPK7Q13164 816 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 FAM110CQ1W6H9 321 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 FAM76BQ5HYJ3 339 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 STXBP5Q5T5C0 1151 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SPATC1Q76KD6 591 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 MIB1Q86YT6 1006 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 DNAAF3Q8N9W5 541 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SHKBP1Q8TBC3 707 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 MYDGFQ969H8 173 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 VPS39Q96JC1 886 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 ZC3H10Q96K80 434 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 TRIM51Q9BSJ1 452 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 NAA50Q9GZZ1 169 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 HMG20AQ9NP66 347 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SH3BGRL2Q9UJC5 107 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 PCDHGA9Q9Y5G4 932 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 IGKV6D-21A0A0A0MT36 114 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 A0A1W2PQJ5 194 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 H3BNH8 94 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 RIPK2O43353 540 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 GCATO75600 419 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 ERBB2P04626 1255 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms