RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 APOOQ9BUR5 198 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 TCEAL2Q9H3H9 227 aaPredicted RBP15.4■□□□□ 0.06
VAPA-201ENST00000340541 GLOD4Q9HC38 313 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 OR1A2Q9Y585 309 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 HACD1B0YJ81 288 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 K7ESM1 405 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 MTSS1O43312 755 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 CA4P22748 312 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 ACP1P24666 158 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 NFKBIAP25963 317 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 TRIM23P36406 574 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 ETV3P41162 512 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 HNRNPKP61978 463 aaKnown RBP eCLIP15.39■□□□□ 0.05
VAPA-201ENST00000340541 E2F1Q01094 437 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 OTUD4Q01804 1114 aaKnown RBP15.39■□□□□ 0.05
VAPA-201ENST00000340541 PTSQ03393 145 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 DNAJC3Q13217 504 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 ZNF211Q13398 564 aaPredicted RBP15.39■□□□□ 0.05
VAPA-201ENST00000340541 PTK2BQ14289 1009 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 NFATC4Q14934 902 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 QPCTQ16769 361 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 LRRC66Q68CR7 880 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 KCTD16Q68DU8 428 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 ESRP1Q6NXG1 681 aaKnown RBP15.39■□□□□ 0.05
VAPA-201ENST00000340541 ZNF662Q6ZS27 426 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 RFLNAQ6ZTI6 216 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 Q6ZVL8 140 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 RBFAQ8N0V3 343 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 NDUFAF2Q8N183 169 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 ZNF548Q8NEK5 533 aaPredicted RBP15.39■□□□□ 0.05
VAPA-201ENST00000340541 LPCAT1Q8NF37 534 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 SPATA22Q8NHS9 363 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 HTR3CQ8WXA8 447 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 FUBP1Q96AE4 644 aaKnown RBP15.39■□□□□ 0.05
VAPA-201ENST00000340541 NUS1Q96E22 293 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 C10orf88Q9H8K7 445 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 GUCA1BQ9UMX6 200 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 IGSF10Q6WRI0 2623 aa15.39■□□□□ 0.05
VAPA-201ENST00000340541 FASNP49327 2511 aaKnown RBP15.39■□□□□ 0.05
VAPA-201ENST00000340541 ANKRD66B4E2M5 251 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 KRT86O43790 486 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 MT-CYBP00156 380 aaPredicted RBP15.38■□□□□ 0.05
VAPA-201ENST00000340541 JUNDP17535 347 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 STC1P52823 247 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 EPHB1P54762 984 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 ARHGEF7Q14155 803 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 PROX2Q3B8N5 592 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 DENND2CQ68D51 928 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 PNCKQ6P2M8 343 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 ZNF567Q8N184 647 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 UBL4BQ8N7F7 174 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 OR4C6Q8NH72 309 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 FAM118BQ9BPY3 351 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 LGR4Q9BXB1 951 aa15.38■□□□□ 0.05
VAPA-201ENST00000340541 GOLGA6L3A6NEY3 463 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 SCAMP1O15126 338 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 SIGLEC6O43699 453 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 TJP3O95049 919 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 SOD1P00441 154 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 HOXC4P09017 264 aaPredicted RBP15.37■□□□□ 0.05
VAPA-201ENST00000340541 CCDC175P0C221 793 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 ZNF30P17039 623 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 NFKB1P19838 968 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 RBL1P28749 1068 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 KIAA1024LP59773 190 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 TARDBPQ13148 414 aaKnown RBP eCLIP15.37■□□□□ 0.051e-10■■■■□ 23.3
VAPA-201ENST00000340541 KLF1Q13351 362 aaPredicted RBP15.37■□□□□ 0.05
VAPA-201ENST00000340541 GALNT3Q14435 633 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 ALG11Q2TAA5 492 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 HS1BP3Q53T59 392 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 HES3Q5TGS1 186 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 KDELC1Q6UW63 502 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 PHACTR4Q8IZ21 702 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 VAT1Q99536 393 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 LRRC61Q9BV99 259 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 KCTD5Q9NXV2 234 aa15.37■□□□□ 0.05
VAPA-201ENST00000340541 TCRBV7S2A1N4TA0A589 114 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 TMEM202A6NGA9 273 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 H3BM21 787 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 H7C0C1 242 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 FFAR2O15552 330 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 PMPCBO75439 489 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 GCATO75600 419 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 CLDN7O95471 211 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 RBP3P10745 1247 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 TEAD1P28347 426 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 EIF2S3P41091 472 aaKnown RBP15.36■□□□□ 0.05
VAPA-201ENST00000340541 ATP5OP48047 213 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 EIF3EP60228 445 aaKnown RBP15.36■□□□□ 0.05
VAPA-201ENST00000340541 PPARDQ03181 441 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 CDK18Q07002 472 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 DPTQ07507 201 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 PCSK7Q16549 785 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 CCDC181Q5TID7 509 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 KDELC2Q7Z4H8 507 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 TSACCQ96A04 125 aaPredicted RBP15.36■□□□□ 0.05
VAPA-201ENST00000340541 EID2BQ96D98 161 aa15.36■□□□□ 0.05
VAPA-201ENST00000340541 OXNAD1Q96HP4 312 aaPredicted RBP15.36■□□□□ 0.05
VAPA-201ENST00000340541 TBATAQ96M53 351 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms