RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ETNK2Q9NVF9 386 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 SEPT10Q9P0V9 454 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 PCDHB11Q9Y5F2 797 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 PCDHGA7Q9Y5G6 932 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 RNF215Q9Y6U7 377 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 A0A1W2PQJ5 194 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 A0A1W2PQM1 296 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 PSMD11O00231 422 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 CASC3O15234 703 aaKnown RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 CCNB1P14635 433 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 CTPS1P17812 591 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 CR2P20023 1033 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 ALDH4A1P30038 563 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 SLC5A2P31639 672 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 ETV3P41162 512 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 GPR1P46091 355 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 GNPDA1P46926 289 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 EPHB1P54762 984 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 MAXP61244 160 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 SKOR1P84550 965 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 ZBED6P86452 979 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 FANCCQ00597 558 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 HLTFQ14527 1009 aaKnown RBP eCLIP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 IQCB1Q15051 598 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 PHF19Q5T6S3 580 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 TMEM164Q5U3C3 297 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 E4F1Q66K89 784 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 RAET1GQ6H3X3 334 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 Q6ZVL8 140 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 SPRED1Q7Z699 444 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 HEATR4Q86WZ0 1026 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 MAP7D3Q8IWC1 876 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 PGBD5Q8N414 524 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 NIPA2Q8N8Q9 360 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 KCTD6Q8NC69 237 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 ZDHHC1Q8WTX9 485 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 DTD2Q96FN9 168 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 BTBD6Q96KE9 485 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 CCNL2Q96S94 520 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 SEMA3CQ99985 751 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 MGME1Q9BQP7 344 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 POLR1EQ9GZS1 481 aaKnown RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 NT5MQ9NPB1 228 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 TRNAU1APQ9NX07 287 aaKnown RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 RCOR3Q9P2K3 495 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 PISDQ9UG56 409 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 ATXN7L1Q9ULK2 861 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 CAPN11Q9UMQ6 739 aa10.65□□□□□ -0.7
CAPN3-202ENST00000337571 LUC7L2Q9Y383 392 aaKnown RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 COL27A1Q8IZC6 1860 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-202ENST00000337571 KIF26BQ2KJY2 2108 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 PMS2P1A4D2B8 440 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 K7ENP7 123 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 AGRPO00253 132 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 NVLO15381 856 aaKnown RBP10.64□□□□□ -0.71
CAPN3-202ENST00000337571 NOBOXO60393 691 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 PGLSO95336 258 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 CPNE6O95741 557 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 PEX11BO96011 259 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 CYP1A2P05177 515 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 CEACAM5P06731 702 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 PYGLP06737 847 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 TCF4P15884 667 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 GM2AP17900 193 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 CA4P22748 312 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 PPM1FP49593 454 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-202ENST00000337571 PDX1P52945 283 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 CDK3Q00526 305 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 TRAF2Q12933 501 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 CLN3Q13286 438 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 AMZ1Q400G9 498 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 HGSNATQ68CP4 663 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 KCTD16Q68DU8 428 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 ALKBH5Q6P6C2 394 aaKnown RBP10.64□□□□□ -0.71
CAPN3-202ENST00000337571 INO80CQ6PI98 192 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-202ENST00000337571 SLC30A9Q6PML9 568 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 USP53Q70EK8 1073 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 HSD11B1LQ7Z5J1 315 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAPN3-202ENST00000337571 CCL4L1Q8NHW4 92 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 GPBAR1Q8TDU6 330 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 SNRNP27Q8WVK2 155 aaKnown RBP10.64□□□□□ -0.71
CAPN3-202ENST00000337571 AP2M1Q96CW1 435 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 NSMCE3Q96MG7 304 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 SPATS2LQ9NUQ6 558 aaKnown RBP10.64□□□□□ -0.71
CAPN3-202ENST00000337571 SUFUQ9UMX1 484 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 LOXL2Q9Y4K0 774 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 TTLL3Q9Y4R7 772 aa10.64□□□□□ -0.71
CAPN3-202ENST00000337571 A0A087X0T9 212 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 SYCE3A1L190 88 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 NPIPB15A6NHN6 443 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-202ENST00000337571 C1QL1O75973 258 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 ECEL1O95672 775 aa10.63□□□□□ -0.71
CAPN3-202ENST00000337571 FGF1P05230 155 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms