RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MBL2P11226 248 aaPredicted RBP8.84□□□□□ -0.99
SNCA-201ENST00000336904 APLP1P51693 650 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 SMAD3P84022 425 aaKnown RBP8.84□□□□□ -0.99
SNCA-201ENST00000336904 GK3PQ14409 553 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 CAPRIN1Q14444 709 aaKnown RBP8.84□□□□□ -0.99
SNCA-201ENST00000336904 PTPRNQ16849 979 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 AAK1Q2M2I8 961 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 KIF19Q2TAC6 998 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 UGT3A1Q6NUS8 523 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 KLC3Q6P597 504 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 BEND5Q7L4P6 421 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 SPATA24Q86W54 205 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ARHGAP18Q8N392 663 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 CLDN19Q8N6F1 224 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ACTRT2Q8TDY3 377 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 MIEF2Q96C03 454 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 C1orf50Q9BV19 199 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 PRKD2Q9BZL6 878 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 PIDD1Q9HB75 910 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 PDFQ9HBH1 243 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ATP11BQ9Y2G3 1177 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 A0A087X1B8 175 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 TCAF2A6NFQ2 919 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 DRGXA6NNA5 263 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 H3BNC9 293 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 TMEM189-UBE2V1I3L0A0 370 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 BTN3A1O00481 513 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 GPC4O75487 556 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 PRLP01236 227 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 IGLV3-27P01718 113 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 HMGA1P17096 107 aaKnown RBP8.84□□□□□ -0.99
SNCA-201ENST00000336904 MAGEA11P43364 429 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 PIK3CGP48736 1102 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ARF5P84085 180 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 PFKPQ01813 784 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 TRAF2Q12933 501 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 FLOT2Q14254 428 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 TRIM60Q495X7 471 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 UNC50Q53HI1 259 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 HECTD3Q5T447 861 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 DHDDSQ86SQ9 333 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 CAMK1DQ8IU85 385 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 KYQ8NBH2 561 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 VPS28Q9UK41 221 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ANGPTL2Q9UKU9 493 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 RAI2Q9Y5P3 530 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 SQORQ9Y6N5 450 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 V9GYQ6 96 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ANKRD36A6QL64 1941 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 RGSL1A5PLK6 1076 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ENO4A6NNW6 628 aa8.83□□□□□ -1
SNCA-201ENST00000336904 WASH4PA8MWX3 477 aa8.83□□□□□ -1
SNCA-201ENST00000336904 NR5A2O00482 541 aa8.83□□□□□ -1
SNCA-201ENST00000336904 SMNDC1O75940 238 aaKnown RBP eCLIP8.83□□□□□ -1
SNCA-201ENST00000336904 TMCC1O94876 653 aa8.83□□□□□ -1
SNCA-201ENST00000336904 APOA4P06727 396 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ALDOCP09972 364 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 CD1DP15813 335 aa8.83□□□□□ -1
SNCA-201ENST00000336904 EEF1DP29692 281 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 MC4RP32245 332 aa8.83□□□□□ -1
SNCA-201ENST00000336904 SLC11A2P49281 568 aa8.83□□□□□ -1
SNCA-201ENST00000336904 CLCN5P51795 746 aa8.83□□□□□ -1
SNCA-201ENST00000336904 TLE2Q04725 743 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ZNF33AQ06730 810 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ZNF177Q13360 481 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 FASTKQ14296 549 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 CYTH1Q15438 398 aa8.83□□□□□ -1
SNCA-201ENST00000336904 TBCCQ15814 346 aa8.83□□□□□ -1
SNCA-201ENST00000336904 PARP15Q460N3 678 aa8.83□□□□□ -1
SNCA-201ENST00000336904 BNC2Q6ZN30 1099 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 ANKS3Q6ZW76 656 aa8.83□□□□□ -1
SNCA-201ENST00000336904 CPNE9Q8IYJ1 553 aa8.83□□□□□ -1
SNCA-201ENST00000336904 APCDD1Q8J025 514 aa8.83□□□□□ -1
SNCA-201ENST00000336904 TEX26Q8N6G2 289 aa8.83□□□□□ -1
SNCA-201ENST00000336904 MAB21L3Q8N8X9 362 aa8.83□□□□□ -1
SNCA-201ENST00000336904 UBXN10Q96LJ8 280 aa8.83□□□□□ -1
SNCA-201ENST00000336904 KLHL32Q96NJ5 620 aa8.83□□□□□ -1
SNCA-201ENST00000336904 TUBGCP5Q96RT8 1024 aa8.83□□□□□ -1
SNCA-201ENST00000336904 MFSD1Q9H3U5 465 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ARNT2Q9HBZ2 717 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ZBTB26Q9HCK0 441 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ZNF334Q9HCZ1 680 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 TRAF6Q9Y4K3 522 aa8.83□□□□□ -1
SNCA-201ENST00000336904 FAM92AA1XBS5 289 aa8.83□□□□□ -1
SNCA-201ENST00000336904 E7ENX8 843 aa8.83□□□□□ -1
SNCA-201ENST00000336904 H3BNX3 289 aa8.83□□□□□ -1
SNCA-201ENST00000336904 PIP5K1BO14986 540 aa8.83□□□□□ -1
SNCA-201ENST00000336904 RNASEH1O60930 286 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 RPP40O75818 363 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 GUCA1CO95843 209 aa8.83□□□□□ -1
SNCA-201ENST00000336904 LINGO3P0C6S8 592 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ZNF37AP17032 561 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 HOXD10P28358 340 aa8.83□□□□□ -1
SNCA-201ENST00000336904 CCNG1P51959 295 aa8.83□□□□□ -1
SNCA-201ENST00000336904 PRKAA2P54646 552 aa8.83□□□□□ -1
SNCA-201ENST00000336904 MTTPP55157 894 aa8.83□□□□□ -1
SNCA-201ENST00000336904 NKX3-2P78367 333 aa8.83□□□□□ -1
SNCA-201ENST00000336904 KLC1Q07866 573 aa8.83□□□□□ -1
SNCA-201ENST00000336904 BLMHQ13867 455 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms