RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 AHCYL1O43865 530 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 SRP72O76094 671 aaKnown RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 OGNP20774 298 aaKnown RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 FGFR3P22607 806 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 HOXD9P28356 352 aaPredicted RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 SLC6A4P31645 630 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 TM4SF4P48230 202 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 KPNA1P52294 538 aaPredicted RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 POLE2P56282 527 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 SH3BP2P78314 561 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 GNA12Q03113 381 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 TRIM25Q14258 630 aaKnown RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 RTP2Q5QGT7 225 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 THEMIS2Q5TEJ8 643 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 SLC30A9Q6PML9 568 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 LARP4Q71RC2 724 aaKnown RBP eCLIP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 TMEM126BQ8IUX1 230 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 SPATA17Q96L03 361 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 ZNF599Q96NL3 588 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 MRPL40Q9NQ50 206 aaKnown RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 PAPOLBQ9NRJ5 636 aaKnown RBP17.69■□□□□ 0.42
LRCH3-201ENST00000334859 MARCH5Q9NX47 278 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 RNF186Q9NXI6 227 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 FAM50BQ9Y247 325 aa17.69■□□□□ 0.42
LRCH3-201ENST00000334859 PPP6CO00743 305 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 RHOBTB1O94844 696 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 SLC11A1P49279 550 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 NME5P56597 212 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 IRX1P78414 480 aaPredicted RBP17.68■□□□□ 0.42
LRCH3-201ENST00000334859 GRM2Q14416 872 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 FUT10Q6P4F1 479 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 UGT2A3Q6UWM9 527 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 DDIASQ8IXT1 998 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 GALNT4Q8N4A0 578 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 NSUN5Q96P11 429 aaKnown RBP17.68■□□□□ 0.42
LRCH3-201ENST00000334859 SLC39A3Q9BRY0 314 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 AARSD1Q9BTE6 412 aaKnown RBP17.68■□□□□ 0.42
LRCH3-201ENST00000334859 SEPT3Q9UH03 358 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 DNAJC15Q9Y5T4 150 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 ZFP37Q9Y6Q3 630 aaPredicted RBP17.68■□□□□ 0.42
LRCH3-201ENST00000334859 SUPT3HB4E1H0 165 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 NRP2O60462 931 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 SUPT3HO75486 399 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 CDK14O94921 469 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 ALDH2P05091 517 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 ALDOCP09972 364 aaKnown RBP17.68■□□□□ 0.42
LRCH3-201ENST00000334859 SCNN1BP51168 640 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 RPS24P62847 133 aaKnown RBP17.68■□□□□ 0.42
LRCH3-201ENST00000334859 LIN52Q52LA3 116 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 IL23RQ5VWK5 629 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 ISLR2Q6UXK2 745 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 GLT6D1Q7Z4J2 308 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 ADCY4Q8NFM4 1077 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 ATP6V1E2Q96A05 226 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 CDKN2AIPNLQ96HQ2 116 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 TRIB3Q96RU7 358 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 MGME1Q9BQP7 344 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 CCDC68Q9H2F9 335 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 AKTIPQ9H8T0 292 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 UBA2Q9UBT2 640 aaPredicted RBP17.68■□□□□ 0.42
LRCH3-201ENST00000334859 GIMAP2Q9UG22 337 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 PCDHB7Q9Y5E2 793 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 SPO11Q9Y5K1 396 aa17.68■□□□□ 0.42
LRCH3-201ENST00000334859 PRORSD1PA6NEY8 169 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 DNAJA2O60884 412 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 RNASEH2AO75792 299 aaKnown RBP17.67■□□□□ 0.42
LRCH3-201ENST00000334859 CRTAMO95727 393 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 RGRP47804 291 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 SUOXP51687 545 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 OXCT1P55809 520 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ILF2Q12905 390 aaKnown RBP17.67■□□□□ 0.42
LRCH3-201ENST00000334859 OR4K2Q8NGD2 314 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 PIP4K2CQ8TBX8 421 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 TWIST2Q8WVJ9 160 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ZNF512Q96ME7 567 aaPredicted RBP17.67■□□□□ 0.42
LRCH3-201ENST00000334859 MAGEH1Q9H213 219 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 POPDC3Q9HBV1 291 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 DNMT3LQ9UJW3 386 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 RNF112Q9ULX5 631 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 AP4B1Q9Y6B7 739 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 SLC38A8A6NNN8 435 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 NR5A2O00482 541 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 AZIN1O14977 448 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 PIP5K1BO14986 540 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ACSL4O60488 711 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ZDHHC11BP0C7U3 371 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ATF6P18850 670 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 FMO4P31512 558 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ZNF140P52738 457 aaPredicted RBP17.67■□□□□ 0.42
LRCH3-201ENST00000334859 FOXA1P55317 472 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 BTG3Q14201 252 aaPredicted RBP17.67■□□□□ 0.42
LRCH3-201ENST00000334859 TYSND1Q2T9J0 566 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 UGT3A2Q3SY77 523 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ALG1LQ6GMV1 187 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 PRSS55Q6UWB4 352 aaPredicted RBP17.67■□□□□ 0.42
LRCH3-201ENST00000334859 CYP2R1Q6VVX0 501 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 TRPC4APQ8TEL6 797 aa17.67■□□□□ 0.42
LRCH3-201ENST00000334859 ZNF483Q8TF39 744 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms