RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CMC1Q7Z7K0 106 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 EGFL8Q99944 293 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 FAM8A1Q9UBU6 413 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 YBX2Q9Y2T7 364 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 SMIM31A0A1B0GVY4 71 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 E5RI56 91 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 NDUFS3O75489 264 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 SERPINA6P08185 405 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 CD86P42081 329 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 NDST2P52849 883 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 MS4A13Q5J8X5 152 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 RALGPS1Q5JS13 557 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 ERAP2Q6P179 960 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 KIAA1324Q6UXG2 1013 aaKnown RBP11.81□□□□□ -0.52
HDAC6-201ENST00000334136 ARCQ7LC44 396 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 C10orf82Q8WW14 230 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 OTUB2Q96DC9 234 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 WDR55Q9H6Y2 383 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-201ENST00000334136 RUBCNLQ9H714 662 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 HEATR9A2RTY3 570 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 C16orf96A6NNT2 1141 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 UBDO15205 165 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 INPP4BO15327 924 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 CLOCKO15516 846 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 STC2O76061 302 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 UQCRBP14927 111 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 PSMB4P28070 264 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 NUP107P57740 925 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 ZRANB3Q5FWF4 1079 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 BBS7Q8IWZ6 715 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 ATP13A3Q9H7F0 1226 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 ZNF395Q9H8N7 513 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-201ENST00000334136 NMRAL1Q9HBL8 299 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 SCHIP1Q9P0W5 487 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-201ENST00000334136 CRTAMO95727 393 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 NEK3P51956 506 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 ABCE1P61221 599 aaKnown RBP11.81□□□□□ -0.52
HDAC6-201ENST00000334136 CDH17Q12864 832 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 POM121L1PQ3SYA9 428 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 PKDCCQ504Y2 493 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 TSPAN14Q8NG11 270 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 TCEAL4Q96EI5 215 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 HMCESQ96FZ2 354 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 RPL10LQ96L21 214 aaKnown RBP11.81□□□□□ -0.52
HDAC6-201ENST00000334136 WDR6Q9NNW5 1121 aaKnown RBP11.81□□□□□ -0.52
HDAC6-201ENST00000334136 WDR70Q9NW82 654 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 KIF17Q9P2E2 1029 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 CDH7Q9ULB5 785 aa11.81□□□□□ -0.52
HDAC6-201ENST00000334136 MGAMO43451 1857 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 C1QTNF3-AMACRE9PGA6 284 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 PABPC1P11940 636 aaKnown RBP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 CLK1P49759 484 aaKnown RBP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 KRT33BQ14525 404 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 ANKS1BQ7Z6G8 1248 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 PLD3Q8IV08 490 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 C10orf107Q8IVU9 208 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 FBXW8Q8N3Y1 598 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 ZNF555Q8NEP9 628 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 RCN3Q96D15 328 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 TRMT2BQ96GJ1 504 aaKnown RBP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 TUBGCP5Q96RT8 1024 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 OMDQ99983 421 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 USP3Q9Y6I4 520 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 SCN1AP35498 2009 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 MYO1GB0I1T2 1018 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 CFAP99D6REC4 459 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 ESRRBO95718 433 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 APOA4P06727 396 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 TYRP14679 529 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 KCNK10P57789 538 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 GRSF1Q12849 480 aaKnown RBP eCLIP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 MAPK11Q15759 364 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 MSANTD2Q6P1R3 559 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 UTS2BQ765I0 119 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 BEND5Q7L4P6 421 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 SATL1Q86VE3 508 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 DEFB123Q8N688 67 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 OR6K2Q8NGY2 324 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 PPP1R16AQ96I34 528 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 SLC39A8Q9C0K1 460 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 S100A14Q9HCY8 104 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 CRLS1Q9UJA2 301 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 EPHX1P07099 455 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 NEK2P51955 445 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 SLC25A11Q02978 314 aaKnown RBP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 PRKAA1Q13131 559 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 GTF2H3Q13889 308 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 CYP1B1Q16678 543 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 ITPRIPL2Q3MIP1 535 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 PATL1Q86TB9 770 aaKnown RBP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 C12orf50Q8NA57 414 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-201ENST00000334136 CALML6Q8TD86 181 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 OR8D1Q8WZ84 308 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 FGF13Q92913 245 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 NDFIP2Q9NV92 336 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 ATXN10Q9UBB4 475 aa11.8□□□□□ -0.52
HDAC6-201ENST00000334136 DNMT3BQ9UBC3 853 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms