RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 NMUR1Q9HB89 426 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 A0A0J9YYE9 177 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 GRM6O15303 877 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 FTH1P02794 183 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 HLA-DQB2P05538 268 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 CES1P23141 567 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 WASP42768 502 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 BNIP1Q12981 228 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 MPPE1Q53F39 396 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 LPCAT4Q643R3 524 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 GET4Q7L5D6 327 aaPredicted RBP13□□□□□ -0.33
VSTM4-202ENST00000332853 FAM124AQ86V42 546 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 CRYBG2Q8N1P7 616 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 SIDT2Q8NBJ9 832 aaKnown RBP13□□□□□ -0.33
VSTM4-202ENST00000332853 HEXDCQ8WVB3 486 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 HIC2Q96JB3 615 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 ADPRHL2Q9NX46 363 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 PLIN3O60664 434 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 RPN2P04844 631 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 EPORP19235 508 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 SLC7A2P52569 658 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 NDST2P52849 883 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 STX19Q8N4C7 294 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 DHRSXQ8N5I4 330 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 ESAMQ96AP7 390 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 MPP4Q96JB8 637 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 HBEGFQ99075 208 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 C16orf70Q9BSU1 422 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 GKN1Q9NS71 199 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 MYRFQ9Y2G1 1151 aa13□□□□□ -0.33
VSTM4-202ENST00000332853 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
VSTM4-202ENST00000332853 LINC00854A0A1B0GVQ3 168 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 TNFAIP8O95379 198 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 TGM3Q08188 693 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 KIAA1324Q6UXG2 1013 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 DCAKDQ8WVC6 231 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 SNRNP27Q8WVK2 155 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 DLG3Q92796 817 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 PPP3R2Q96LZ3 170 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 C7orf26Q96N11 449 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 CCSER2Q9H7U1 834 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 DDX28Q9NUL7 540 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 TMCO1Q9UM00 188 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 DUSP12Q9UNI6 340 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 SLC45A1Q9Y2W3 748 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 CHD4Q14839 1912 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 SLC28A1O00337 649 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 IRAK2O43187 625 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 PPP2R1BP30154 601 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 PAGE2BQ5JRK9 111 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 BTN2A2Q8WVV5 523 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 NELFEP18615 380 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 GPX6P59796 221 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 RPS24P62847 133 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 FKBPLQ9UIM3 349 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 WDR4P57081 412 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 TIGD2Q4W5G0 525 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 CHST9Q7L1S5 443 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 ZNF557Q8N988 423 aaPredicted RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 COL26A1Q96A83 441 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 RTKNQ9BST9 563 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 RAD18Q9NS91 495 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 PRAMEF1O95521 474 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 F2P00734 622 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 CNPP09543 421 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 IMPDH2P12268 514 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 GATMP50440 423 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 ADRM1Q16186 407 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 RAVER1Q8IY67 606 aaKnown RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 CHPFQ8IZ52 775 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 FSTL5Q8N475 847 aaPredicted RBP12.99□□□□□ -0.33
VSTM4-202ENST00000332853 WDR48Q8TAF3 677 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 MAGEC3Q8TD91 643 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 TWIST2Q8WVJ9 160 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 CD101Q93033 1021 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 ZNF510Q9Y2H8 683 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
VSTM4-202ENST00000332853 GRIN2DO15399 1336 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 LAMA4Q16363 1823 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 IDH3AP50213 366 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 YBEYP58557 167 aaPredicted RBP12.98□□□□□ -0.33
VSTM4-202ENST00000332853 ARPINQ7Z6K5 226 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 CLVS1Q8IUQ0 354 aaPredicted RBP12.98□□□□□ -0.33
VSTM4-202ENST00000332853 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
VSTM4-202ENST00000332853 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 A0A1B0GVM2 712 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 TCAF2A6NFQ2 919 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 ENPP3O14638 875 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 PRKCGP05129 697 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 CCDC142Q17RM4 750 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 IRGCQ6NXR0 463 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 WRAP53Q9BUR4 548 aaKnown RBP12.98□□□□□ -0.33
VSTM4-202ENST00000332853 DNAJC28Q9NX36 388 aa12.98□□□□□ -0.33
VSTM4-202ENST00000332853 C1QTNF3-AMACRE9PGA6 284 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms