RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 DPPA5A6NC42 116 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 H3BNC9 293 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 CAPN15O75808 1086 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 LINC00032P0C843 101 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 HTR7P34969 479 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 VEGFBP49765 207 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 SH3BP2P78314 561 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 NRG1Q02297 640 aaPredicted RBP18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 CEACAM7Q14002 265 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 CYTH1Q15438 398 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 CYP2R1Q6VVX0 501 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 KYQ8NBH2 561 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 ACTRT2Q8TDY3 377 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 LRCH3Q96II8 777 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 CDK15Q96Q40 435 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 SIKE1Q9BRV8 207 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 EBF3Q9H4W6 596 aa18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 POLR3BQ9NW08 1133 aaPredicted RBP18.16■□□□□ 0.5
LYSMD4-201ENST00000332728 CHD9Q3L8U1 2897 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 SLC7A4O43246 635 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 RPP40O75818 363 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 PEX19P40855 299 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 PFKPQ01813 784 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 SFT2D3Q587I9 215 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 HMGCLL1Q8TB92 370 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 PTCD2Q8WV60 388 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 SPDL1Q96EA4 605 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 TNKS2Q9H2K2 1166 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 WDR41Q9HAD4 459 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 TRAF6Q9Y4K3 522 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 H7C4K7 107 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 PRLP01236 227 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 CA5AP35218 305 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 ALDH1A3P47895 512 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 PRKAA2P54646 552 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 YBX1P67809 324 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 TRAF2Q12933 501 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 CAMK1DQ8IU85 385 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 LRRC49Q8IUZ0 686 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 RDH11Q8TC12 318 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 ERLEC1Q96DZ1 483 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 GSTO2Q9H4Y5 243 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 STN1Q9H668 368 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 MRM3Q9HC36 420 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 ANGPTL2Q9UKU9 493 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 YIPF1Q9Y548 306 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 ASB1Q9Y576 335 aa18.15■□□□□ 0.5
LYSMD4-201ENST00000332728 SMAD6O43541 496 aaKnown RBP18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 NDUFS3O75489 264 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 TMCC1O94876 653 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 THRAP10827 490 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 CHRM3P20309 590 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 ARF5P84085 180 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 PLIN5Q00G26 463 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 KIF19Q2TAC6 998 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 UNC50Q53HI1 259 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 BRSK1Q8TDC3 778 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 IGSF21Q96ID5 467 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 UBXN10Q96LJ8 280 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 C1orf21Q9H246 121 aa18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 ZNF334Q9HCZ1 680 aaPredicted RBP18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.14■□□□□ 0.5
LYSMD4-201ENST00000332728 PRUNE2Q8WUY3 3088 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 NDST3O95803 873 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 ZDHHC11BP0C7U3 371 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 CD1DP15813 335 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 MC4RP32245 332 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 AQP4P55087 323 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 MRNIPQ6NTE8 343 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 PIWIL4Q7Z3Z4 852 aaKnown RBP18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 LRRC43Q8N309 656 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 MAB21L3Q8N8X9 362 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 BHLHE22Q8NFJ8 381 aaPredicted RBP18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 GDPD5Q8WTR4 605 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 YIPF3Q9GZM5 350 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 SEPT3Q9UH03 358 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 SORCS3Q9UPU3 1222 aa18.14■□□□□ 0.49
LYSMD4-201ENST00000332728 BTN3A1O00481 513 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 FGF1P05230 155 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 COL6A2P12110 1019 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 CCNG1P51959 295 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 CDC16Q13042 620 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 GRB7Q14451 532 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 DNAJB7Q7Z6W7 309 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 SPATA24Q86W54 205 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 SPATA17Q96L03 361 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 ZNF184Q99676 751 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 RTKNQ9BST9 563 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 CCDC68Q9H2F9 335 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 COPS7BQ9H9Q2 264 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 PHF24Q9UPV7 400 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 UBDO15205 165 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 H2AFYO75367 372 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 CREB5Q02930 508 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 FLOT2Q14254 428 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 PGM2L1Q6PCE3 622 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 LMNTD2Q8IXW0 634 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 APCDD1Q8J025 514 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 PHC3Q8NDX5 983 aa18.13■□□□□ 0.49
LYSMD4-201ENST00000332728 FAM110BQ8TC76 370 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms