RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 SPAARA0A1B0GVQ0 90 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 TCRBV7S2A1N4TA0A589 114 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 GOLGA6CA6NDK9 693 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 GOLGA6BA6NDN3 693 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 TNFSF14O43557 240 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 SDC3O75056 442 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 LDOC1O95751 146 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-201ENST00000332345 GOLGA6DP0CG33 693 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 ALPPL2P10696 532 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 TEAD1P28347 426 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 KIAA1024LP59773 190 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 EIF2B5Q13144 721 aaKnown RBP13.99□□□□□ -0.17
LIMS1-201ENST00000332345 CDKN3Q16667 212 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 RAET1GQ6H3X3 334 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 KDELC1Q6UW63 502 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 KDM7AQ6ZMT4 941 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 ZNF765Q7L2R6 523 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 KANSL1Q7Z3B3 1105 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 REXO1L1PQ8IX06 675 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 SLC25A45Q8N413 288 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 SLC35B2Q8TB61 432 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 AP2M1Q96CW1 435 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 TBATAQ96M53 351 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 WDR92Q96MX6 357 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 SPATA13Q96N96 652 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 FSD1LQ9BXM9 530 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 GPR63Q9BZJ6 419 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 ABCG8Q9H221 673 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 KCNF1Q9H3M0 494 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 WDR26Q9H7D7 661 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 PHPT1Q9NRX4 125 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-201ENST00000332345 RAD18Q9NS91 495 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 GOLGA6AQ9NYA3 693 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 PKD2L2Q9NZM6 624 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 SPASTQ9UBP0 616 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 FTSJ1Q9UET6 329 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 APOBEC2Q9Y235 224 aaKnown RBP13.99□□□□□ -0.17
LIMS1-201ENST00000332345 R3HDM2Q9Y2K5 976 aaKnown RBP13.99□□□□□ -0.17
LIMS1-201ENST00000332345 CSNK1G3Q9Y6M4 447 aa13.99□□□□□ -0.17
LIMS1-201ENST00000332345 A0A0U1RQS6 177 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 F5H423 210 aaPredicted RBP13.98□□□□□ -0.17
LIMS1-201ENST00000332345 TNFRSF10CO14798 259 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 SCAMP1O15126 338 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 GCATO75600 419 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 TNFP01375 233 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 C1SP09871 688 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 CTSEP14091 401 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 HLA-DPA1P20036 260 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 GPR1P46091 355 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 SPINT3P49223 89 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 HK3P52790 923 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 SRP54P61011 504 aaKnown RBP13.98□□□□□ -0.17
LIMS1-201ENST00000332345 PARP6Q2NL67 630 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 TPRG1LQ5T0D9 272 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 ARHGEF18Q6ZSZ5 1173 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 HID1Q8IV36 788 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 FAM71DQ8N9W8 422 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 IPMKQ8NFU5 416 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 OR56A4Q8NGH8 313 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 BAHD1Q8TBE0 780 aaPredicted RBP13.98□□□□□ -0.17
LIMS1-201ENST00000332345 CCDC110Q8TBZ0 833 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 FUBP1Q96AE4 644 aaKnown RBP13.98□□□□□ -0.17
LIMS1-201ENST00000332345 OXNAD1Q96HP4 312 aaPredicted RBP13.98□□□□□ -0.17
LIMS1-201ENST00000332345 MRGPRX2Q96LB1 330 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 TMEM121Q9BTD3 319 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 DUSP23Q9BVJ7 150 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 TEX101Q9BY14 249 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 CDH19Q9H159 772 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 FAM83DQ9H4H8 585 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 TRABDQ9H4I3 376 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 KLQ9UEF7 1012 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 APOBEC3BQ9UH17 382 aaKnown RBP13.98□□□□□ -0.17
LIMS1-201ENST00000332345 CD84Q9UIB8 345 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 KLF15Q9UIH9 416 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
LIMS1-201ENST00000332345 CACNA1AO00555 2505 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 K7ESM1 405 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 PSMD3O43242 534 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 AQP9O43315 295 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 LIASO43766 372 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 KIF5CO60282 957 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 CEP104O60308 925 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 RASGRP1O95267 797 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 TRIM16O95361 564 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 ADRB1P08588 477 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 MYCLP1P12525 358 aaPredicted RBP13.97□□□□□ -0.17
LIMS1-201ENST00000332345 ACTN2P35609 894 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 SLC1A5Q15758 541 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 PRRT3Q5FWE3 981 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 SIRPB2Q5JXA9 342 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 ZNF569Q5MCW4 686 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 ADAMTSL4Q6UY14 1074 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 RFLNAQ6ZTI6 216 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 LYSMD3Q7Z3D4 306 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 RD3Q7Z3Z2 195 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 TMC3Q7Z5M5 1100 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 HEATR4Q86WZ0 1026 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 PHACTR4Q8IZ21 702 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 SDR16C5Q8N3Y7 309 aa13.97□□□□□ -0.17
LIMS1-201ENST00000332345 FSTL5Q8N475 847 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms