RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TXLNGQ9NUQ3 528 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 GRID1Q9ULK0 1009 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TCRBV7S3A2A0A539 114 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 C2orf81A6NN90 581 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 HGSO14964 777 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-201ENST00000331239 EDF1O60869 148 aaKnown RBP9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ALDH1A2O94788 518 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 POLBP06746 335 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 NUDT1P36639 197 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 NRLP54845 237 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 CREB5Q02930 508 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 MESP2Q0VG99 397 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 SETDB1Q15047 1291 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ERAP2Q6P179 960 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ASRGL1Q7L266 308 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 NRSN1Q8IZ57 195 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 SPEM1Q8N4L4 309 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 KIF2BQ8N4N8 673 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 CAMKK1Q8N5S9 505 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 FBXO36Q8NEA4 188 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 STYXQ8WUJ0 223 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 STAMBPL1Q96FJ0 436 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TM6SF2Q9BZW4 377 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TNKS2Q9H2K2 1166 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 SLCO1B3Q9NPD5 702 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ZDHHC4Q9NPG8 344 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 NSMCE4AQ9NXX6 385 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 CACNA2D2Q9NY47 1150 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TCAF1Q9Y4C2 921 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 USH1CQ9Y6N9 552 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 A0A1W2PPM1 405 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 H7C0S8 307 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 LEFTY1O75610 366 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 UNC5CO95185 931 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 KLF8O95600 359 aaPredicted RBP9.5□□□□□ -0.89
C11orf54-201ENST00000331239 PYGLP06737 847 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 KRT16P08779 473 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 KRT4P19013 534 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 OXTRP30559 389 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 HADHAP40939 763 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 EPHB1P54762 984 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 IHHQ14623 411 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 AGERQ15109 404 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 BBS9Q3SYG4 887 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 TMEM52BQ4KMG9 183 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 DPPA4Q7L190 304 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 GALNT7Q86SF2 657 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 STK40Q8N2I9 435 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 TAB3Q8N5C8 712 aaPredicted RBP9.5□□□□□ -0.89
C11orf54-201ENST00000331239 OR52K1Q8NGK4 314 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 PIP4K2CQ8TBX8 421 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ERP27Q96DN0 273 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 PCED1AQ9H1Q7 454 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ZDHHC6Q9H6R6 413 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 LMAN1LQ9HAT1 526 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ACTL7AQ9Y615 435 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 CCDC163A0A0D9SF12 145 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 KRBA1A5PL33 1030 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 C16orf96A6NNT2 1141 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 TSPAN6O43657 245 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 DCTN3O75935 186 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 HOXB2P14652 356 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ALDH3A1P30838 453 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 TIE1P35590 1138 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 HMGCLP35914 325 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 CLCN5P51795 746 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 NEK3P51956 506 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 FZD5Q13467 585 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 UGP2Q16851 508 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ARSIQ5FYB1 569 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 FAXCQ5TGI0 409 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 LVRNQ6Q4G3 990 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ADGRD1Q6QNK2 874 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 C3orf62Q6ZUJ4 267 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ERN2Q76MJ5 926 aaKnown RBP9.5□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF765Q7L2R6 523 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 CAMK1DQ8IU85 385 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 PALM2Q8IXS6 379 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 PJA1Q8NG27 643 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 FAM126AQ9BYI3 521 aaPredicted RBP9.5□□□□□ -0.89
C11orf54-201ENST00000331239 MYLK2Q9H1R3 596 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 TBC1D17Q9HA65 648 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 MCM8Q9UJA3 840 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 CHKBQ9Y259 395 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 PCDHGC4Q9Y5F7 938 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 F5P12259 2224 aa9.5□□□□□ -0.89
C11orf54-201ENST00000331239 A0A1W2PQF6 199 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 DCXO43602 365 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 ADAM23O75077 832 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TIMP2P16035 220 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 LPOP22079 712 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TEAD1P28347 426 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 VIPR1P32241 457 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 MSH2P43246 934 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 NUBP1P53384 320 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms