RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TMCC1O94876 653 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 NTRK1P04629 796 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 DSG1Q02413 1049 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 NAB1Q13506 487 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 DPYSQ14117 519 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 PARP15Q460N3 678 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 PKDCCQ504Y2 493 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 FAM45BPQ6NSW5 357 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 OR9I1Q8NGQ6 314 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 FAM45AQ8TCE6 357 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 TCF25Q9BQ70 676 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 ZFYVE1Q9HBF4 777 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
SYNM-201ENST00000328642 NKX1-2Q9UD57 310 aaPredicted RBP16.02■□□□□ 0.16
SYNM-201ENST00000328642 PCDHGB4Q9UN71 923 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 LRRC14BA6NHZ5 514 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 DLX3O60479 287 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 SLC25A14O95258 325 aaPredicted RBP16.02■□□□□ 0.16
SYNM-201ENST00000328642 GLUD1P00367 558 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 ADH1AP07327 375 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 POLR2EP19388 210 aaKnown RBP16.02■□□□□ 0.16
SYNM-201ENST00000328642 GRIA3P42263 894 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 YBEYP58557 167 aaPredicted RBP16.02■□□□□ 0.16
SYNM-201ENST00000328642 SETD3Q86TU7 594 aaPredicted RBP16.02■□□□□ 0.16
SYNM-201ENST00000328642 WDR60Q8WVS4 1066 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 LRMDAQ9H2I8 198 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 FBRSL1Q9HCM7 1045 aaKnown RBP16.02■□□□□ 0.16
SYNM-201ENST00000328642 GID8Q9NWU2 228 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 ZDHHC2Q9UIJ5 367 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 A0A087X1B8 175 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 GNG14A0A1W2PPG7 69 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 PRAMEF1O95521 474 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.15
SYNM-201ENST00000328642 CALRP27797 417 aaKnown RBP16.02■□□□□ 0.15
SYNM-201ENST00000328642 CTGFP29279 349 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 SKIV2L2P42285 1042 aaKnown RBP16.02■□□□□ 0.15
SYNM-201ENST00000328642 MAP7Q14244 749 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 TMEM199Q8N511 208 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 HJURPQ8NCD3 748 aaPredicted RBP16.02■□□□□ 0.15
SYNM-201ENST00000328642 OR6Y1Q8NGX8 325 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 FIG4Q92562 907 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 PARVBQ9HBI1 364 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 SLCO1B7G3V0H7 640 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 RPP40O75818 363 aaKnown RBP16.02■□□□□ 0.15
SYNM-201ENST00000328642 ITPKAP23677 461 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 HSPA7P48741 367 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 FNDC3BQ53EP0 1204 aaKnown RBP16.02■□□□□ 0.15
SYNM-201ENST00000328642 ACSBG2Q5FVE4 666 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 WASHC2DQ5SRD0 308 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 KLHDC9Q8NEP7 349 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 FAM162AQ96A26 154 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 PYCR2Q96C36 320 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 C7orf26Q96N11 449 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 TRIM8Q9BZR9 551 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 CAPN10Q9HC96 672 aa16.02■□□□□ 0.15
SYNM-201ENST00000328642 MARCH4Q9P2E8 410 aaPredicted RBP16.02■□□□□ 0.15
SYNM-201ENST00000328642 COCHO43405 550 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 PKMP14618 531 aaKnown RBP16.01■□□□□ 0.15
SYNM-201ENST00000328642 MSH3P20585 1137 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 SCNN1AP37088 669 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 SLC7A2P52569 658 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 VPS26BQ4G0F5 336 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 LINC01465Q8N7H1 131 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 DENND1AQ8TEH3 1009 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 WRAP53Q9BUR4 548 aaKnown RBP16.01■□□□□ 0.15
SYNM-201ENST00000328642 VCX3AQ9NNX9 186 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 SH3BP4Q9P0V3 963 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 RGSL1A5PLK6 1076 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 UNCXA6NJT0 531 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 RASSF9O75901 435 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 SOAT1P35610 550 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 SLC18A2Q05940 514 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 ELMO1Q92556 727 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 CDKN2AIPNLQ96HQ2 116 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 EMILIN2Q9BXX0 1053 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 ATP13A3Q9H7F0 1226 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 POLR3BQ9NW08 1133 aaPredicted RBP16.01■□□□□ 0.15
SYNM-201ENST00000328642 SCML2Q9UQR0 700 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 MAFKO60675 156 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 NIPAL4Q0D2K0 466 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 INPP5AQ14642 412 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 FBXL19Q6PCT2 694 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 ELMSAN1Q6PJG2 1045 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 CEP97Q8IW35 865 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 TRIM15Q9C019 465 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 OPTCQ9UBM4 332 aa16.01■□□□□ 0.15
SYNM-201ENST00000328642 TRIP12Q14669 1992 aaPredicted RBP16■□□□□ 0.15
SYNM-201ENST00000328642 AZIN1O14977 448 aa16■□□□□ 0.15
SYNM-201ENST00000328642 H2AFYO75367 372 aaKnown RBP16■□□□□ 0.15
SYNM-201ENST00000328642 MYO1DO94832 1006 aa16■□□□□ 0.15
SYNM-201ENST00000328642 PSME3P61289 254 aa16■□□□□ 0.15
SYNM-201ENST00000328642 RPL38P63173 70 aaKnown RBP16■□□□□ 0.15
SYNM-201ENST00000328642 IL10RBQ08334 325 aa16■□□□□ 0.15
SYNM-201ENST00000328642 PCLAFQ15004 111 aa16■□□□□ 0.15
SYNM-201ENST00000328642 TBCELQ5QJ74 424 aa16■□□□□ 0.15
SYNM-201ENST00000328642 ALKAL1Q6UXT8 129 aa16■□□□□ 0.15
SYNM-201ENST00000328642 LRRC49Q8IUZ0 686 aa16■□□□□ 0.15
SYNM-201ENST00000328642 KREMEN2Q8NCW0 462 aa16■□□□□ 0.15
SYNM-201ENST00000328642 CYB5D2Q8WUJ1 264 aa16■□□□□ 0.15
SYNM-201ENST00000328642 TMEM174Q8WUU8 243 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms