RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DNAJC15Q9Y5T4 150 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ANGPT2O15123 496 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 LDB2O43679 373 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 RHOBTB1O94844 696 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 SEMA3AQ14563 771 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 OR4D1Q15615 310 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 MYLK3Q32MK0 819 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 AFMIDQ63HM1 303 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 RETREG3Q86VR2 466 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 TICAM1Q8IUC6 712 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 LRRC49Q8IUZ0 686 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 CCDC117Q8IWD4 279 aaPredicted RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 CLYBLQ8N0X4 340 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 ATP6V0D2Q8N8Y2 350 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 MYEOVQ96EZ4 313 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 HIC2Q96JB3 615 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 RPL10LQ96L21 214 aaKnown RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 CCT7Q99832 543 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 EFHD1Q9BUP0 239 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 ARNT2Q9HBZ2 717 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 NMRK2Q9NPI5 230 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 SLC4A7Q9Y6M7 1214 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 V9GYQ6 96 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 MUSKO15146 869 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 SEC24DO94855 1032 aaPredicted RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 CDK14O94921 469 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 HSPA8P11142 646 aaKnown RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 HGFP14210 728 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 ZNF26P17031 533 aaPredicted RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 RPL10P27635 214 aaKnown RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 HTR7P34969 479 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 NDST2P52849 883 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 PLOD1Q02809 727 aaPredicted RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 NFE2Q16621 373 aaPredicted RBP14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 FUT11Q495W5 492 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 FAM45BPQ6NSW5 357 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 MRNIPQ6NTE8 343 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 KLHDC10Q6PID8 442 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 CYHR1Q6ZMK1 362 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 SPPL2CQ8IUH8 684 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 FUNDC1Q8IVP5 155 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 PCYOX1LQ8NBM8 494 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 FAM45AQ8TCE6 357 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 GRIN3AQ8TCU5 1115 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 TWIST2Q8WVJ9 160 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 CCDC68Q9H2F9 335 aa14.04□□□□□ -0.16
ATP2C1-201ENST00000328560 CES1P23141 567 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 HERVK_113P63132 956 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 TAF10Q12962 218 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 IKBKEQ14164 716 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 ARTNQ5T4W7 220 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 LARP4Q71RC2 724 aaKnown RBP eCLIP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 SCML4Q8N228 414 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 ZFP28Q8NHY6 868 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 ARRDC2Q8TBH0 407 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 ERVK-6Q9BXR3 956 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 SARS2Q9NP81 518 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 CNOT6Q9ULM6 557 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 GABRQQ9UN88 632 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 H3BMM5 538 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 RTN3O95197 1032 aaPredicted RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 PAX3P23760 479 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 HSPA13P48723 471 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 LSAMPQ13449 338 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 CTXN3Q4LDR2 81 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 BEND5Q7L4P6 421 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 SLCO4A1Q96BD0 722 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 A0A0D9SEW6 157 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 A0A1B0GTL3 188 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 PDLIM1O00151 329 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 AZIN1O14977 448 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 VILLO15195 856 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 ATXN1LP0C7T5 689 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 CD1DP15813 335 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 SCNN1BP51168 640 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 RPL26P61254 145 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 MGAT3Q09327 533 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 MSANTD2Q6P1R3 559 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 RNF180Q86T96 592 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 AHI1Q8N157 1196 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 GIPC2Q8TF65 315 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 C1orf74Q96LT6 269 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 ZNF512Q96ME7 567 aaPredicted RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 GLT1D1Q96MS3 346 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 MRPS26Q9BYN8 205 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 ARHGAP39Q9C0H5 1083 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 POLR1EQ9GZS1 481 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 NACA2Q9H009 215 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 FBXO44Q9H4M3 255 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 CATSPERZQ9NTU4 200 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 RNF112Q9ULX5 631 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 TBC1D30Q9Y2I9 924 aa14.03□□□□□ -0.16
ATP2C1-201ENST00000328560 H3BSA7 217 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 TRIM24O15164 1050 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 TSPAN3O60637 253 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 CYBAP13498 195 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 ATP6V1B2P21281 511 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 EEF1DP29692 281 aaKnown RBP14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 TBCELQ5QJ74 424 aa14.02□□□□□ -0.16
ATP2C1-201ENST00000328560 PAQR3Q6TCH7 311 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms