RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ARHGEF9O43307 516 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 SNRPB2P08579 225 aaKnown RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 ATP5F1P24539 256 aaPredicted RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 AASDHQ4L235 1098 aaPredicted RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 PKN3Q6P5Z2 889 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 C10orf71Q711Q0 1435 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 RBM12BQ8IXT5 1001 aaKnown RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 RORBQ92753 470 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 SMOQ99835 787 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 HGH1Q9BTY7 390 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 SLC25A23Q9BV35 468 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 CRTAC1Q9NQ79 661 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 SLCO1B7G3V0H7 640 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 HIST1H2AGP0C0S8 130 aaPredicted RBP15.26■□□□□ 0.03
VARS2-201ENST00000321897 ZNF182P17025 639 aaPredicted RBP15.26■□□□□ 0.03
VARS2-201ENST00000321897 HIST1H2ADP20671 130 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 VPS26BQ4G0F5 336 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 ANKS6Q68DC2 871 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 TMEM86AQ8N2M4 240 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 TOP6BLQ8N6T0 577 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 SMYD1Q8NB12 490 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 HIST1H2AHQ96KK5 128 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 FCRL3Q96P31 734 aaPredicted RBP15.26■□□□□ 0.03
VARS2-201ENST00000321897 HIST1H2AJQ99878 128 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 H2AFJQ9BTM1 129 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 CLPBQ9H078 707 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 SCN3BQ9NY72 215 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 ZNF682O95780 498 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 GCAP28676 217 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 ADAM17P78536 824 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 SLC10A7Q0GE19 358 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 LRRC73Q5JTD7 316 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 SPESP1Q6UW49 350 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 IL27RAQ6UWB1 636 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 CUZD1Q86UP6 607 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 OR4K2Q8NGD2 314 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 OMA1Q96E52 524 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 HMCESQ96FZ2 354 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 FANCEQ9HB96 536 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 TAS2R13Q9NYV9 303 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 MYH9P35579 1960 aaKnown RBP15.26■□□□□ 0.03
VARS2-201ENST00000321897 LRP5O75197 1615 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 J3KR12 359 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 SLC1A2P43004 574 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 HSPA14Q0VDF9 509 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 FAM110CQ1W6H9 321 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 AP5B1Q2VPB7 878 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 C11orf96Q7Z7L8 435 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 FAM126BQ8IXS8 530 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 ARRDC4Q8NCT1 418 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 PPP1R10Q96QC0 940 aaKnown RBP15.26■□□□□ 0.03
VARS2-201ENST00000321897 VAT1Q99536 393 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 POLR1EQ9GZS1 481 aaKnown RBP15.26■□□□□ 0.03
VARS2-201ENST00000321897 ACTR8Q9H981 624 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 MRGBPQ9NV56 204 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 LIMD1Q9UGP4 676 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 SLC8A2Q9UPR5 921 aa15.26■□□□□ 0.03
VARS2-201ENST00000321897 E9PAM4 449 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 SEC24AO95486 1093 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 AHSGP02765 367 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 ATP5BP06576 529 aaKnown RBP15.25■□□□□ 0.03
VARS2-201ENST00000321897 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
VARS2-201ENST00000321897 DEFA1P59665 94 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 DEFA3P59666 94 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 TAPT1Q6NXT6 567 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 KCTD8Q6ZWB6 473 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 ERI1Q8IV48 349 aaKnown RBP15.25■□□□□ 0.03
VARS2-201ENST00000321897 AHI1Q8N157 1196 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 SFRP1Q8N474 314 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 ACMSDQ8TDX5 336 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 CANT1Q8WVQ1 401 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 TRPM5Q9NZQ8 1165 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 CDC14AQ9UNH5 594 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 DBTP11182 482 aaKnown RBP15.25■□□□□ 0.03
VARS2-201ENST00000321897 NCK1P16333 377 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 OR1D2P34982 312 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 PWP1Q13610 501 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 OR13C4Q8NGS5 318 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 APBB2Q92870 758 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 CIPCQ9C0C6 399 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 CEP44Q9C0F1 390 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 FBRSL1Q9HCM7 1045 aaKnown RBP15.25■□□□□ 0.03
VARS2-201ENST00000321897 ST14Q9Y5Y6 855 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 GPC6Q9Y625 555 aaPredicted RBP15.25■□□□□ 0.03
VARS2-201ENST00000321897 A0A0U1RQS6 177 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 ABCB1P08183 1280 aaPredicted RBP15.25■□□□□ 0.03
VARS2-201ENST00000321897 VAC14Q08AM6 782 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 KCNA10Q16322 511 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 SLCO6A1Q86UG4 719 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 TEKT5Q96M29 485 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 ZYG11BQ9C0D3 744 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 KANSL3Q9P2N6 904 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 TLL2Q9Y6L7 1015 aa15.25■□□□□ 0.03
VARS2-201ENST00000321897 NUP205Q92621 2012 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 CABYRO75952 493 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 CPSF4O95639 269 aaKnown RBP15.24■□□□□ 0.03
VARS2-201ENST00000321897 CDK4P11802 303 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 PRR23BQ6ZRT6 265 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 ADCK2Q7Z695 626 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 RALGPS2Q86X27 583 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms