RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 FBXO48Q5FWF7 155 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 TMEM214Q6NUQ4 689 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 AKTIPQ9H8T0 292 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 USE1Q9NZ43 259 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SCHIP1Q9P0W5 487 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ZMYM5Q9UJ78 669 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ZCWPW2A0A1B0GU75 182 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 A0A1W2PPW3 197 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 UBXN8O00124 270 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 MYO1DO94832 1006 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 KCNH1O95259 989 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 THRBP10828 461 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 UGT1A6P19224 532 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 UGT1A1P22309 533 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 UGT1A4P22310 534 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 UGT1A3P35503 534 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 UGT1A5P35504 534 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF846Q147U1 533 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 MYBPC3Q14896 1274 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 XKR5Q6UX68 686 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 GLT6D1Q7Z4J2 308 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 SHKBP1Q8TBC3 707 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 PNPT1Q8TCS8 783 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 SPPL2BQ8TCT7 592 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 MUC3BQ9H195 1237 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 RMND5AQ9H871 391 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 RIMS3Q9UJD0 308 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 CNOT11Q9UKZ1 510 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 FAM72CH0Y354 149 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 H0YJX3 145 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 GUCA1CO95843 209 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 HIST1H2AGP0C0S8 130 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 HIST1H2ADP20671 130 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 YAP1P46937 504 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 INPP1P49441 399 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 ATP6V0D1P61421 351 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 FAM72AQ5TYM5 149 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 FAM72DQ6L9T8 149 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 CRTC3Q6UUV7 619 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 MILR1Q7Z6M3 343 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 FAM72BQ86X60 149 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 SVOPQ8N4V2 548 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 AADATQ8N5Z0 425 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 LPCAT1Q8NF37 534 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 KBTBD7Q8WVZ9 684 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 ISOC1Q96CN7 298 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 HIST1H2AHQ96KK5 128 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 KLHL32Q96NJ5 620 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 HIST1H2AJQ99878 128 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 H2AFJQ9BTM1 129 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 CLPBQ9H078 707 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 SLC25A51Q9H1U9 297 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 PARVBQ9HBI1 364 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 TUBA8Q9NY65 449 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 H3BMM5 538 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 NRP1O14786 923 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 ARPC2O15144 300 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 FAM20BO75063 409 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 CLIC3O95833 236 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 NR4A1P22736 598 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 POLR2JP52435 117 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 LCP2Q13094 533 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 IQSEC1Q6DN90 963 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 KIAA1841Q6NSI8 718 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 GLB1LQ6UWU2 654 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 ARHGAP36Q6ZRI8 547 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 TRPV3Q8NET8 790 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 TSPAN18Q96SJ8 248 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 GPATCH1Q9BRR8 931 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 CHID1Q9BWS9 393 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 DGKBQ9Y6T7 804 aa12.73□□□□□ -0.37
DNMT3A-202ENST00000321117 OR1G1P47890 313 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 PSEN2P49810 448 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 OXCT1P55809 520 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 CLCQ05315 142 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 GK3PQ14409 553 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 GRM2Q14416 872 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 MAPKAPK3Q16644 382 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 GNASQ5JWF2 1037 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 PLEKHH3Q7Z736 793 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SMYD1Q8NB12 490 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 OR4L1Q8NH43 312 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 FNDC8Q8TC99 324 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 MLPHQ9BV36 600 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SLC39A8Q9C0K1 460 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 VPS28Q9UK41 221 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 DCLK1O15075 740 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SLC7A4O43246 635 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SEC22BO75396 215 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 USP2O75604 605 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 CDK4P11802 303 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 IMPDH2P12268 514 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms