RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ITGADQ13349 1161 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SIM2Q14190 667 aaPredicted RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 VARS2Q5ST30 1063 aaKnown RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 TMEM214Q6NUQ4 689 aaKnown RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 TMEM26Q6ZUK4 368 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 EID3Q8N140 333 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 CBR4Q8N4T8 237 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SLCO2A1Q92959 643 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 RASSF1Q9NS23 344 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 NDUFA13Q9P0J0 144 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 PRKAG3Q9UGI9 489 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 TCAF1Q9Y4C2 921 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 RAI2Q9Y5P3 530 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 PDLIM1O00151 329 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 HLA-DQB2P05538 268 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 CYP2C18P33260 490 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 TYW3Q6IPR3 259 aaKnown RBP16.47■□□□□ 0.23
CLIP4-201ENST00000320081 OSCP1Q8WVF1 389 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 TWIST2Q8WVJ9 160 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 PYCR2Q96C36 320 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 TMEM209Q96SK2 561 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 IGFLR1Q9H665 355 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 PSMD13Q9UNM6 376 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 CHD2O14647 1828 aaKnown RBP16.47■□□□□ 0.23
CLIP4-201ENST00000320081 OR2AG2A6NM03 316 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 PMM2O15305 246 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 HNRNPRO43390 633 aaKnown RBP16.47■□□□□ 0.23
CLIP4-201ENST00000320081 UQCRBP14927 111 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 SERPINB1P30740 379 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 ARHGAP15Q53QZ3 475 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 ERAP2Q6P179 960 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 C9orf16Q9BUW7 83 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 ETAA1Q9NY74 926 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 PNMA8CA0A1B0GUJ8 204 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 PIP5K1BO14986 540 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 SLC25A14O95258 325 aaPredicted RBP16.47■□□□□ 0.23
CLIP4-201ENST00000320081 KCNQ1P51787 676 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 KPNA1P52294 538 aaPredicted RBP16.47■□□□□ 0.23
CLIP4-201ENST00000320081 ZCCHC8Q6NZY4 707 aaKnown RBP16.47■□□□□ 0.23
CLIP4-201ENST00000320081 STX19Q8N4C7 294 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 ZNF570Q96NI8 536 aa16.47■□□□□ 0.23
CLIP4-201ENST00000320081 CORO1CQ9ULV4 474 aaPredicted RBP16.47■□□□□ 0.23
CLIP4-201ENST00000320081 PARP4Q9UKK3 1724 aaKnown RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 ZNF142P52746 1687 aaPredicted RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 FZD9O00144 591 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 ANXA5P08758 320 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 DDX5P17844 614 aaKnown RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 UGT1A6P19224 532 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 UGT1A1P22309 533 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 UGT1A4P22310 534 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 UGT1A3P35503 534 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 UGT1A5P35504 534 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 ACVRL1P37023 503 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 NKAPQ8N5F7 415 aaKnown RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 CLDN19Q8N6F1 224 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 NIPA2Q8N8Q9 360 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 OR52E6Q96RD3 313 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 ZNF180Q9UJW8 692 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 PCDHB12Q9Y5F1 795 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 GLTPD2A6NH11 291 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 HOXA2O43364 376 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 MTX2O75431 263 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 MTHFD1P11586 935 aaKnown RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 NEK2P51955 445 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 SATL1Q86VE3 508 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 ZCCHC7Q8N3Z6 543 aaKnown RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 BTN2A2Q8WVV5 523 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 TEKT2Q9UIF3 430 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 ZDHHC2Q9UIJ5 367 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 RGS14O43566 566 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 NIPSNAP2O75323 286 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 CST1P01037 141 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 RPL5P46777 297 aaKnown RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 YAP1P46937 504 aaKnown RBP16.46■□□□□ 0.23
CLIP4-201ENST00000320081 TTPAP49638 278 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 PRKAA2P54646 552 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 CARTPTQ16568 116 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 RORBQ92753 470 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 BTN2A3PQ96KV6 586 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 DYRK1BQ9Y463 629 aa16.46■□□□□ 0.23
CLIP4-201ENST00000320081 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.22
CLIP4-201ENST00000320081 OR56A5P0C7T3 313 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 RPS7P62081 194 aaKnown RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 HPCAP84074 193 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CCDC15Q0P6D6 951 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CSTF3Q12996 717 aaKnown RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 BRMS1LQ5PSV4 323 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 ELMSAN1Q6PJG2 1045 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 OTOP2Q7RTS6 562 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 PATL1Q86TB9 770 aaKnown RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 OR8H2Q8N162 312 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 ZNF366Q8N895 744 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 SMOQ99835 787 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 TSC22D4Q9Y3Q8 395 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 CNTN5O94779 1100 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 PKMP14618 531 aaKnown RBP16.45■□□□□ 0.22
CLIP4-201ENST00000320081 WASP42768 502 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 FBXW4P57775 412 aa16.45■□□□□ 0.22
CLIP4-201ENST00000320081 BLMHQ13867 455 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms