RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OXTRP30559 389 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 CRYBB1P53674 252 aaPredicted RBP19.09■□□□□ 0.65
RTN4-201ENST00000317610 PCSK7Q16549 785 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 KANK2Q63ZY3 851 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 TERB1Q8NA31 727 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 TWIST2Q8WVJ9 160 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 LRRC58Q96CX6 371 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 IMP4Q96G21 291 aaKnown RBP19.09■□□□□ 0.65
RTN4-201ENST00000317610 RPF2Q9H7B2 306 aaKnown RBP19.09■□□□□ 0.65
RTN4-201ENST00000317610 EGFL7Q9UHF1 273 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 OAZ3Q9UMX2 235 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 MROH6A6NGR9 719 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 RTL3Q8N8U3 475 aaKnown RBP19.09■□□□□ 0.65
RTN4-201ENST00000317610 PAPD5Q8NDF8 572 aaKnown RBP19.09■□□□□ 0.65
RTN4-201ENST00000317610 ABHD16BQ9H3Z7 469 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 ADARB2Q9NS39 739 aaKnown RBP19.09■□□□□ 0.65
RTN4-201ENST00000317610 RNF103-CHMP3A0A140T963 221 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 TCRBV5S2A0A599 114 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 H3BMQ9 156 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 AZIN1O14977 448 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 PIP5K1BO14986 540 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 CLASP2O75122 1294 aaKnown RBP19.08■□□□□ 0.65
RTN4-201ENST00000317610 ATE1O95260 518 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 CD1DP15813 335 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 PCSK1P29120 753 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 HMOX2P30519 316 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 CDH13P55290 713 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 GRB7Q14451 532 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 C16orf72Q14CZ0 275 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 ABRAXAS1Q6UWZ7 409 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 PATL1Q86TB9 770 aaKnown RBP19.08■□□□□ 0.65
RTN4-201ENST00000317610 TRIM74Q86UV6 250 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 TRIM73Q86UV7 250 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 ZNF354CQ86Y25 554 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 PTRH1Q86Y79 214 aaKnown RBP19.08■□□□□ 0.65
RTN4-201ENST00000317610 TSPEARQ8WU66 669 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 HDAC10Q969S8 669 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 FCRL2Q96LA5 508 aaPredicted RBP19.08■□□□□ 0.65
RTN4-201ENST00000317610 COG8Q96MW5 612 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 RTP3Q9BQQ7 232 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 YTHDF1Q9BYJ9 559 aaKnown RBP19.08■□□□□ 0.65
RTN4-201ENST00000317610 PATJQ8NI35 1801 aa19.08■□□□□ 0.65
RTN4-201ENST00000317610 TRIP12Q14669 1992 aaPredicted RBP19.08■□□□□ 0.65
RTN4-201ENST00000317610 HNRNPCP07910 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
RTN4-201ENST00000317610 FDXRP22570 491 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 VARSP26640 1264 aaKnown RBP19.08■□□□□ 0.64
RTN4-201ENST00000317610 RFC2P35250 354 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 CAPGP40121 348 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 YBX1P67809 324 aaKnown RBP19.08■□□□□ 0.64
RTN4-201ENST00000317610 ILF2Q12905 390 aaKnown RBP19.08■□□□□ 0.64
RTN4-201ENST00000317610 PMS2P3Q13401 168 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 CAPRIN1Q14444 709 aaKnown RBP19.08■□□□□ 0.64
RTN4-201ENST00000317610 ACBD5Q5T8D3 534 aaPredicted RBP19.08■□□□□ 0.64
RTN4-201ENST00000317610 TWF2Q6IBS0 349 aaKnown RBP19.08■□□□□ 0.64
RTN4-201ENST00000317610 BLOC1S3Q6QNY0 202 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 DEFB132Q7Z7B7 95 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 PIM3Q86V86 326 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 PNPLA1Q8N8W4 532 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 C3orf58Q8NDZ4 430 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 SH3RF2Q8TEC5 729 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 FATE1Q969F0 183 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 TMEM125Q96AQ2 219 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 PLEKHG4BQ96PX9 1271 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 TRIM54Q9BYV2 358 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 FNIP2Q9P278 1114 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 PTGDR2Q9Y5Y4 395 aa19.08■□□□□ 0.64
RTN4-201ENST00000317610 WASH4PA8MWX3 477 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 CLOCKO15516 846 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 SNAP91O60641 907 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 LBPP18428 481 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 MRPL19P49406 292 aaKnown RBP19.07■□□□□ 0.64
RTN4-201ENST00000317610 CLCNKBP51801 687 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 RAB15P59190 212 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 RAB39AQ14964 217 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 FAM171BQ6P995 826 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 USP51Q70EK9 711 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 PTGR2Q8N8N7 351 aaPredicted RBP19.07■□□□□ 0.64
RTN4-201ENST00000317610 FBXL20Q96IG2 436 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 CNDP2Q96KP4 475 aaKnown RBP19.07■□□□□ 0.64
RTN4-201ENST00000317610 DCUN1D5Q9BTE7 237 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 SEZ6LQ9BYH1 1024 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 TUBB1Q9H4B7 451 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 MID1IP1Q9NPA3 183 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 GIMAP2Q9UG22 337 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 FADS3Q9Y5Q0 445 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 TREHO43280 583 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 TPST1O60507 370 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 CCR1P32246 355 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 GJA5P36382 358 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 SUOXP51687 545 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 ARSDP51689 593 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 FOXA1P55317 472 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 NRG1Q02297 640 aaPredicted RBP19.07■□□□□ 0.64
RTN4-201ENST00000317610 MFSD10Q14728 455 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 CYBRD1Q53TN4 286 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 LDB1Q86U70 411 aaPredicted RBP19.07■□□□□ 0.64
RTN4-201ENST00000317610 DCP1BQ8IZD4 617 aaKnown RBP19.07■□□□□ 0.64
RTN4-201ENST00000317610 CYGBQ8WWM9 190 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 SMOC2Q9H3U7 446 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 SMPD3Q9NY59 655 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms