RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 KCTD16Q68DU8 428 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 NYAP1Q6ZVC0 841 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 TECPR1Q7Z6L1 1165 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 TSPAN33Q86UF1 283 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 NLRP8Q86W28 1048 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 VSIG1Q86XK7 387 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 CPNE8Q86YQ8 564 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 CNGA4Q8IV77 575 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 RAVER1Q8IY67 606 aaKnown RBP17.73■□□□□ 0.43
TPM1-203ENST00000317516 CCDC13Q8IYE1 715 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM1-203ENST00000317516 PQLC3Q8N755 202 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 RAPGEF5Q92565 580 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 HDAC11Q96DB2 347 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 CCDC97Q96F63 343 aaPredicted RBP17.73■□□□□ 0.43
TPM1-203ENST00000317516 HIC2Q96JB3 615 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 SLC46A1Q96NT5 459 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 CHP1Q99653 195 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 STRADBQ9C0K7 418 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 TRNAU1APQ9NX07 287 aaKnown RBP17.73■□□□□ 0.43
TPM1-203ENST00000317516 APPL1Q9UKG1 709 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 CCDC187A0A096LP49 1063 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 A0A0J9YYE9 177 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 EIF4E1BA6NMX2 242 aaKnown RBP17.72■□□□□ 0.43
TPM1-203ENST00000317516 ZW10O43264 779 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 TRBC1P01850 177 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 RPLP0P05388 317 aaKnown RBP17.72■□□□□ 0.43
TPM1-203ENST00000317516 CEACAM5P06731 702 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 ZFXP17010 805 aaPredicted RBP17.72■□□□□ 0.43
TPM1-203ENST00000317516 SLC1A1P43005 524 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 CCL7P80098 99 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 EIF3IQ13347 325 aaKnown RBP17.72■□□□□ 0.43
TPM1-203ENST00000317516 C14orf28Q4W4Y0 310 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 CERCAMQ5T4B2 595 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 LRRC38Q5VT99 294 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 LRRC66Q68CR7 880 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 SPACA3Q8IXA5 215 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 NRSN1Q8IZ57 195 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 PELI3Q8N2H9 469 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 RNF214Q8ND24 703 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 GPBAR1Q8TDU6 330 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 AP2M1Q96CW1 435 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 TMEM74Q96NL1 305 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 TDRD1Q9BXT4 1180 aaKnown RBP17.72■□□□□ 0.43
TPM1-203ENST00000317516 LRRN3Q9H3W5 708 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 DTLQ9NZJ0 730 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 LRIT1Q9P2V4 623 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 INTUQ9ULD6 942 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 CHKBQ9Y259 395 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 ADAMTS20P59510 1910 aa17.72■□□□□ 0.43
TPM1-203ENST00000317516 B4DGG1 531 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
TPM1-203ENST00000317516 NUDT21O43809 227 aaKnown RBP17.71■□□□□ 0.43
TPM1-203ENST00000317516 MTA2O94776 668 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 JCHAINP01591 159 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 UCNP55089 124 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 PTSQ03393 145 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 TLE3Q04726 772 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 SLC10A2Q12908 348 aaPredicted RBP17.71■□□□□ 0.43
TPM1-203ENST00000317516 FOXR1Q6PIV2 292 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 ZNF765Q7L2R6 523 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 CCNJLQ8IV13 435 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 ARRDC2Q8TBH0 407 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 KCNE4Q8WWG9 221 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 LIN37Q96GY3 246 aaPredicted RBP17.71■□□□□ 0.43
TPM1-203ENST00000317516 ADGRE3Q9BY15 652 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 FRMD8Q9BZ67 464 aaPredicted RBP17.71■□□□□ 0.43
TPM1-203ENST00000317516 DPH1Q9BZG8 443 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 ABCG8Q9H221 673 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 PRORYQ9H606 182 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 SUDS3Q9H7L9 328 aaPredicted RBP17.71■□□□□ 0.43
TPM1-203ENST00000317516 PCDH9Q9HC56 1237 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 ASCL3Q9NQ33 180 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 SPTLC3Q9NUV7 552 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 RABGEF1Q9UJ41 708 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 SUFUQ9UMX1 484 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 SLC17A4Q9Y2C5 497 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 HEY1Q9Y5J3 304 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 ASXL3Q9C0F0 2248 aa17.71■□□□□ 0.43
TPM1-203ENST00000317516 CAPN8A6NHC0 703 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 APOL1O14791 398 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 NOBOXO60393 691 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 HLA-DQB2P05538 268 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 IVLP07476 585 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 GNPDA1P46926 289 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 INHBCP55103 352 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 PPIDQ08752 370 aaKnown RBP17.7■□□□□ 0.42
TPM1-203ENST00000317516 BIRC2Q13490 618 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 HLTFQ14527 1009 aaKnown RBP eCLIP17.7■□□□□ 0.42
TPM1-203ENST00000317516 PDK1Q15118 436 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 PTPRRQ15256 657 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 SOWAHCQ53LP3 525 aaPredicted RBP17.7■□□□□ 0.42
TPM1-203ENST00000317516 ADAMTSL4Q6UY14 1074 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 Q8N9G6 341 aaPredicted RBP17.7■□□□□ 0.42
TPM1-203ENST00000317516 EXD1Q8NHP7 514 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 CCL4L1Q8NHW4 92 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 CCHCR1Q8TD31 782 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 CRELD1Q96HD1 420 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 NAF1Q96HR8 494 aaKnown RBP17.7■□□□□ 0.42
TPM1-203ENST00000317516 UBL7Q96S82 380 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms