RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HMGCLL1Q8TB92 370 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 TFAP2CQ92754 450 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 SPAG4Q9NPE6 437 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 INIPQ9NRY2 104 aa17.21■□□□□ 0.35
SCAMP4-201ENST00000316097 MTMR11A4FU01 709 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 FBP2O00757 339 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 AP2A1O95782 977 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 TPH1P17752 444 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 PSMD8P48556 350 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 PFKPQ01813 784 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 LRP8Q14114 963 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 AGKQ53H12 422 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 SPOUT1Q5T280 376 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 NTAN1Q96AB6 310 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 VPS50Q96JG6 964 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 COX4I2Q96KJ9 171 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 GPR22Q99680 433 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 TTPALQ9BTX7 342 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 ANKRD6Q9Y2G4 727 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 F9P00740 461 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 FASTKQ14296 549 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 C6orf10Q5SRN2 563 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 CANT1Q8WVQ1 401 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 SGF29Q96ES7 293 aa17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 MAELQ96JY0 434 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 UHRF1Q96T88 793 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 GMPR2Q9P2T1 348 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-201ENST00000316097 TRPC5OSA6NMA1 111 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 IRAK2O43187 625 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 PAGE1O75459 146 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 SLC35E2BP0CK96 405 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 SCAPQ12770 1279 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 TRAP1Q12931 704 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 PPP4R4Q6NUP7 873 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 MIB1Q86YT6 1006 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 SLC41A1Q8IVJ1 513 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 CENPLQ8N0S6 344 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 PELI3Q8N2H9 469 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 STON2Q8WXE9 905 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 TOX2Q96NM4 488 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 CWH43Q9H720 699 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 SMOXQ9NWM0 555 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 PTPRDP23468 1912 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 A0A1W2PPW3 197 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 TRIM43BA6NCK2 446 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 HMBSP08397 361 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 HNRNPLP14866 589 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 NMBRP28336 390 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 OR1D2P34982 312 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 ETFBP38117 255 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 GRIA3P42263 894 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 PITRM1Q5JRX3 1037 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 XKR5Q6UX68 686 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 LYSMD3Q7Z3D4 306 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 ANKFN1Q8N957 763 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 BORCS5Q969J3 196 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 TRIM43Q96BQ3 446 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 SLC39A3Q9BRY0 314 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 MCMBPQ9BTE3 642 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 CXorf21Q9HAI6 301 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 CASS4Q9NQ75 786 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 NDFIP2Q9NV92 336 aa17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 TUBA8Q9NY65 449 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 RCOR3Q9P2K3 495 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-201ENST00000316097 CAPN15O75808 1086 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 IGLV3-25P01717 112 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 PTPN3P26045 913 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 GABRB3P28472 473 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 PHEXP78562 749 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 RELAQ04206 551 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 EFEMP1Q12805 493 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 TAF10Q12962 218 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 EIF4EBP2Q13542 120 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 TGFBIQ15582 683 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 TSTD2Q5T7W7 516 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 GPR107Q5VW38 600 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 NCCRP1Q6ZVX7 275 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 ZC3HC1Q86WB0 502 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 CBR4Q8N4T8 237 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 FBXO22Q8NEZ5 403 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 TCF12Q99081 682 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 MRPL9Q9BYD2 267 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 RPF2Q9H7B2 306 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 MPP6Q9NZW5 540 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 TARM1B6A8C7 271 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 H3BMQ9 156 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 ZNF701M0R085 212 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 CLTBP09497 229 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 GPR17Q13304 367 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 SLC12A1Q13621 1099 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 MAPRE2Q15555 327 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 GRAMD4Q6IC98 578 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 CNSTQ6PJW8 725 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 ARHGAP36Q6ZRI8 547 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 C14orf80Q86SX3 495 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 DHFR2Q86XF0 187 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 NXNL1Q96CM4 212 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms