RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 TCF7L2Q9NQB0 619 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 RAI2Q9Y5P3 530 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 LRRC14BA6NHZ5 514 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CIB2O75838 187 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 NDST3O95803 873 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 HLA-DPA1P20036 260 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CSKP41240 450 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 EPHB3P54753 998 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 EPHB1P54762 984 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CDH13P55290 713 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 FAM83EQ2M2I3 478 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 GAREM2Q75VX8 874 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 APCDD1Q8J025 514 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 OR4L1Q8NH43 312 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CCDC124Q96CT7 223 aaKnown RBP12.43□□□□□ -0.42
RNF4-201ENST00000314289 CATSPER2Q96P56 530 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 RANBP9Q96S59 729 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 IRAK4Q9NWZ3 460 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 DNAJC28Q9NX36 388 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 A0A1W2PRU2 124 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 GRID2O43424 1007 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TGM5O43548 720 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 OR1I1O60431 355 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 PDE5AO76074 875 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 LTA4HP09960 611 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 ANPEPP15144 967 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 RAG1P15918 1043 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TRAF2Q12933 501 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 CDH18Q13634 790 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 LSM12Q3MHD2 195 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 C5orf22Q49AR2 442 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 C1orf146Q5VVC0 180 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 SEL1L3Q68CR1 1132 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 DDI1Q8WTU0 396 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 FATE1Q969F0 183 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 PTERQ96BW5 349 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TMA16Q96EY4 203 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 TOX2Q96NM4 488 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 MRPL57Q9BQC6 102 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 CATSPERZQ9NTU4 200 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 NDE1Q9NXR1 346 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 GALPQ9UBC7 116 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 PCDHB9Q9Y5E1 797 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 CEP290O15078 2479 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 ILVBLA1L0T0 632 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 A8MT66 165 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TMEM114B3SHH9 223 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 MATN2O00339 956 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 PPP6CO00743 305 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 SMAD6O43541 496 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 RPP40O75818 363 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 APOA4P06727 396 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 ALPIP09923 528 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 CLCN5P51795 746 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 RAB33AQ14088 237 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TECRLQ5HYJ1 363 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 C6orf163Q5TEZ5 329 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TPGS2Q68CL5 300 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 KIAA0408Q6ZU52 694 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 FRMD7Q6ZUT3 714 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TMPRSS6Q8IU80 811 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 SCUBE1Q8IWY4 988 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 SLC22A17Q8WUG5 538 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 RPL10LQ96L21 214 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 PANX3Q96QZ0 392 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 TDRD1Q9BXT4 1180 aaKnown RBP12.42□□□□□ -0.42
RNF4-201ENST00000314289 NCKIPSDQ9NZQ3 722 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 PDP2Q9P2J9 529 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 FKBPLQ9UIM3 349 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 RAP2CQ9Y3L5 183 aa12.42□□□□□ -0.42
RNF4-201ENST00000314289 A0A087X1B8 175 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 PAPSS2O95340 614 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 SIX3O95343 332 aaPredicted RBP12.41□□□□□ -0.42
RNF4-201ENST00000314289 F11P03951 625 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 TIAL1Q01085 375 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNF4-201ENST00000314289 AGAP9Q5VTM2 703 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 KLHDC10Q6PID8 442 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 PIANPQ8IYJ0 282 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 HIPK4Q8NE63 616 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 FEM1AQ9BSK4 669 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 HCFC1R1Q9NWW0 138 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 SAGE1Q9NXZ1 904 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 PPM1HQ9ULR3 514 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 H3BMM5 538 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 HDAC3O15379 428 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 FGF18O76093 207 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 COL6A2P12110 1019 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 AOC1P19801 751 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 CR2P20023 1033 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 RHOAP61586 193 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 CLEC6AQ6EIG7 209 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 PSAPL1Q6NUJ1 521 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 SPRED2Q7Z698 418 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 CAMK1DQ8IU85 385 aa12.41□□□□□ -0.42
RNF4-201ENST00000314289 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms