RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 H3BNX3 289 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 PAPSS2O95340 614 aaPredicted RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 LINC00032P0C843 101 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 FGFR3P22607 806 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 CASP2P42575 452 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 HK2P52789 917 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 FOXA1P55317 472 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 DNAJB13P59910 316 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 FAM189BP81408 668 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 ZNF177Q13360 481 aaPredicted RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 PTPRNQ16849 979 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 ZNF423Q2M1K9 1284 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 PIGGQ5H8A4 983 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 ZNF678Q5SXM1 525 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 TAS2R42Q7RTR8 314 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 NLRC5Q86WI3 1866 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 TEX26Q8N6G2 289 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 CASD1Q96PB1 797 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 SEPT3Q9UH03 358 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 SQORQ9Y6N5 450 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 MIA3Q5JRA6 1907 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 DRGXA6NNA5 263 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 MRASO14807 208 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 SNAP91O60641 907 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 NDST3O95803 873 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 ALDH1A1P00352 501 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 IMPDH1P20839 514 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 SH3BP2P78314 561 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 TSNQ15631 228 aaKnown RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 CMPK2Q5EBM0 449 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 GATA6Q92908 595 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 C19orf60Q96EN9 201 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 FEM1CQ96JP0 617 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 RANBP9Q96S59 729 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 TRIM8Q9BZR9 551 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 FNIP2Q9P278 1114 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 PTPRDP23468 1912 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 MOXD2PA6NHM9 499 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 BTN3A1O00481 513 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 ZNF37AP17032 561 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 VCLP18206 1134 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 CHRM3P20309 590 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 HOXD9P28356 352 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 MAPKAPK2P49137 400 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 CCNHP51946 323 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 STX5Q13190 355 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 UNC50Q53HI1 259 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 RNF219Q5W0B1 726 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 TMCO2Q7Z6W1 182 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 CPSF7Q8N684 471 aaKnown RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 ATP6V1E2Q96A05 226 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 PPWD1Q96BP3 646 aaKnown RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 TSC22D3Q99576 134 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 GPR21Q99679 349 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 GMPR2Q9P2T1 348 aaKnown RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 PSMD13Q9UNM6 376 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 A8MX80 341 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 CDC7O00311 574 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 PIP5K1BO14986 540 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 COCHO43405 550 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 BNIP3LO60238 219 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 OR1I1O60431 355 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 CRTAMO95727 393 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 KLKB1P03952 638 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 CD1DP15813 335 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 RARS2Q5T160 578 aaKnown RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 HECTD3Q5T447 861 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 REP15Q6BDI9 236 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 CARNMT1Q8N4J0 409 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 FAR2Q96K12 515 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 NSMCE3Q96MG7 304 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 TM6SF2Q9BZW4 377 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 EPS15L1Q9UBC2 864 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 FKBPLQ9UIM3 349 aa11.53□□□□□ -0.56
PTPN2-201ENST00000309660 AGO1Q9UL18 857 aaKnown RBP11.53□□□□□ -0.56
PTPN2-201ENST00000309660 IQCF5A8MTL0 148 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 ARVCFO00192 962 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 NIPSNAP2O75323 286 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 EEF1DP29692 281 aaKnown RBP11.52□□□□□ -0.56
PTPN2-201ENST00000309660 STC1P52823 247 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 HERVK_113P63132 956 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 MRPL58Q14197 206 aaKnown RBP11.52□□□□□ -0.56
PTPN2-201ENST00000309660 NRF1Q16656 503 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 SEPT8Q92599 483 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 DCUN1D1Q96GG9 259 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 CNBD2Q96M20 576 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 KLHL32Q96NJ5 620 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 HBEGFQ99075 208 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 ERVK-6Q9BXR3 956 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 ZNF385DQ9H6B1 395 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 AKTIPQ9H8T0 292 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 TAS2R13Q9NYV9 303 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 GALPQ9UBC7 116 aa11.52□□□□□ -0.56
PTPN2-201ENST00000309660 A0A1B0GTL3 188 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 C2orf78A6NCI8 922 aa11.52□□□□□ -0.57
PTPN2-201ENST00000309660 NPEPPSL1A6NEC2 478 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms