RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 WSCD1Q658N2 575 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 TTC29Q8NA56 475 aaPredicted RBP15.28■□□□□ 0.04
LEMD3-201ENST00000308330 CTRCQ99895 268 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 IER2Q9BTL4 223 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 CHST12Q9NRB3 414 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 PMPCBO75439 489 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 OR2B3O76000 313 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 CES5AQ6NT32 575 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 C11orf88Q6PI97 169 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 PLEKHG7Q6ZR37 379 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 LRRC8DQ7L1W4 858 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 CARNMT1Q8N4J0 409 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 C7orf43Q8WVR3 580 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 MED28Q9H204 178 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 GPATCH2LQ9NWQ4 482 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 PARP4Q9UKK3 1724 aaKnown RBP15.28■□□□□ 0.04
LEMD3-201ENST00000308330 CDC40O60508 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
LEMD3-201ENST00000308330 SPATA31C1P0DKV0 1188 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 GZMAP12544 262 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 SAMD4BQ5PRF9 694 aaKnown RBP15.28■□□□□ 0.04
LEMD3-201ENST00000308330 PGBD2Q6P3X8 592 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 POLE4Q9NR33 117 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 VPS28Q9UK41 221 aa15.28■□□□□ 0.04
LEMD3-201ENST00000308330 GOLGA4Q13439 2230 aaKnown RBP15.27■□□□□ 0.04
LEMD3-201ENST00000308330 H3BM21 787 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 BTN3A1O00481 513 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 THEGLP0DJG4 465 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 APLP1P51693 650 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 CAPZA1P52907 286 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 ADIGQ0VDE8 80 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 ZIK1Q3SY52 487 aaPredicted RBP15.27■□□□□ 0.04
LEMD3-201ENST00000308330 SLC15A4Q8N697 577 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 FBXO30Q8TB52 745 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 SLC20A1Q8WUM9 679 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 ELOVL4Q9GZR5 314 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 CPNE5Q9HCH3 593 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 OLA1Q9NTK5 396 aaKnown RBP15.27■□□□□ 0.04
LEMD3-201ENST00000308330 COPZ2Q9P299 210 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 SFMBT1Q9UHJ3 866 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 PEX16Q9Y5Y5 336 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 KPNA5O15131 536 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 GPR85P60893 370 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 GTF2BQ00403 316 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 MTX3Q5HYI7 312 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 IDO2Q6ZQW0 420 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 SLFN11Q7Z7L1 901 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 PEX13Q92968 403 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 ART5Q96L15 291 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 TMEM109Q9BVC6 243 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 EML4Q9HC35 981 aaKnown RBP15.27■□□□□ 0.04
LEMD3-201ENST00000308330 SRRDQ9UH36 339 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 PLA2G4CQ9UP65 541 aa15.27■□□□□ 0.04
LEMD3-201ENST00000308330 A6NL46 340 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 ZMPSTE24O75844 475 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 SMPD1P17405 629 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 ARF4P18085 180 aaPredicted RBP15.27■□□□□ 0.03
LEMD3-201ENST00000308330 GRK3P35626 688 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 PCBP1Q15365 356 aaKnown RBP eCLIP15.27■□□□□ 0.03
LEMD3-201ENST00000308330 DUPD1Q68J44 220 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 STRA8Q7Z7C7 330 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 MARVELD2Q8N4S9 558 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 LZTR1Q8N653 840 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 UFSP2Q9NUQ7 469 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 ZNF624Q9P2J8 865 aaPredicted RBP15.27■□□□□ 0.03
LEMD3-201ENST00000308330 RPH3AQ9Y2J0 694 aaPredicted RBP15.27■□□□□ 0.03
LEMD3-201ENST00000308330 SF3B1O75533 1304 aaKnown RBP eCLIP15.27■□□□□ 0.032e-6■■■■■ 43.1
LEMD3-201ENST00000308330 INPP4BO15327 924 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 KCNH1O95259 989 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 TSPAN19P0C672 248 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 ITGA1P56199 1179 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 GTF2H3Q13889 308 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 CCL14Q16627 93 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 ATAD1Q8NBU5 361 aa15.27■□□□□ 0.03
LEMD3-201ENST00000308330 LMO7Q8WWI1 1683 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 POLR1CO15160 346 aaPredicted RBP15.26■□□□□ 0.03
LEMD3-201ENST00000308330 CYP1A2P05177 515 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
LEMD3-201ENST00000308330 RIPPLY1Q0D2K3 151 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 FGL2Q14314 439 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 SLC51BQ86UW2 128 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 P2RY8Q86VZ1 359 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 CLEC4DQ8WXI8 215 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 RERGLQ9H628 205 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 CNOT11Q9UKZ1 510 aaKnown RBP15.26■□□□□ 0.03
LEMD3-201ENST00000308330 SMIM35A0A1B0GVV1 85 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 NFICP08651 508 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 SELPP16109 830 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 YWHAZP63104 245 aaKnown RBP15.26■□□□□ 0.03
LEMD3-201ENST00000308330 LRRC74AQ0VAA2 488 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 SCUBE3Q8IX30 993 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 TMIEQ8NEW7 156 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 PPHLN1Q8NEY8 458 aaKnown RBP15.26■□□□□ 0.03
LEMD3-201ENST00000308330 CHPT1Q8WUD6 406 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 SEPHS2Q99611 448 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 ACO2Q99798 780 aaKnown RBP15.26■□□□□ 0.03
LEMD3-201ENST00000308330 ZNF696Q9H7X3 374 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 XPO7Q9UIA9 1087 aaKnown RBP15.26■□□□□ 0.03
LEMD3-201ENST00000308330 IGKV6D-41A0A0C4DH26 115 aa15.26■□□□□ 0.03
LEMD3-201ENST00000308330 TRIM38O00635 465 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms