RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RABL3Q5HYI8 236 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 TRNP1Q6NT89 227 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ZNF540Q8NDQ6 660 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 FCRL2Q96LA5 508 aaPredicted RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 TBATAQ96M53 351 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 SMOXQ9NWM0 555 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 UXTQ9UBK9 157 aaPredicted RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 AGRPO00253 132 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 FFAR3O14843 346 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 GPR42O15529 346 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ARIH2O95376 493 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 EPS8Q12929 822 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 DDX39BQ13838 428 aaKnown RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 RAB39AQ14964 217 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 TARBP2Q15633 366 aaKnown RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 NOMO2Q5JPE7 1267 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 NCCRP1Q6ZVX7 275 aaPredicted RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 WDR12Q9GZL7 423 aaKnown RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 CNGB3Q9NQW8 809 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 CATSPERZQ9NTU4 200 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 CDH9Q9ULB4 789 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 GPC6Q9Y625 555 aaPredicted RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 K7EPI3 171 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 NOBOXO60393 691 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 RAMP2O60895 175 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 STBD1O95210 358 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 FTH1P02794 183 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ODC1P11926 461 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 CYP3A5P20815 502 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 TPTEP56180 551 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 INCA1Q0VD86 236 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 INAQ16352 499 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 MAPKAPK3Q16644 382 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 PTPRNQ16849 979 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 CTU1Q7Z7A3 348 aaKnown RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 GALNT5Q7Z7M9 940 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ZC3H7AQ8IWR0 971 aaKnown RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 OR9Q1Q8NGQ5 310 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ARNTL2Q8WYA1 636 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ELMO1Q92556 727 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 TOP1MTQ969P6 601 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 PARVBQ9HBI1 364 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 TBCCD1Q9NVR7 557 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 RAD51BO15315 384 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 MSI1O43347 362 aaKnown RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 EGFRP00533 1210 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ZNF37AP17032 561 aaPredicted RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ZNF135P52742 658 aaPredicted RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 RUNX1T1Q06455 604 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 GRM2Q14416 872 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ACAP2Q15057 778 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 RNF19BQ6ZMZ0 732 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 TAGAPQ8N103 731 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 SVOPQ8N4V2 548 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 LEMD2Q8NC56 503 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 SPPL2BQ8TCT7 592 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 S100ZQ8WXG8 99 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 LRRC58Q96CX6 371 aa13.45□□□□□ -0.26
SEC23A-201ENST00000307712 OLA1Q9NTK5 396 aaKnown RBP13.45□□□□□ -0.26
SEC23A-201ENST00000307712 ITGB4P16144 1822 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 TCAF2A6NFQ2 919 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 LSM1O15116 133 aaKnown RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 MED26O95402 600 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 JUNP05412 331 aaKnown RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 SLC35E2BP0CK96 405 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 SMIM18P0DKX4 95 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 GSK3BP49841 420 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 POLR2JP52435 117 aaKnown RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 SULT2A1Q06520 285 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 TAZQ16635 292 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 LBX2Q6XYB7 198 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 ATG14Q6ZNE5 492 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 GPRC5AQ8NFJ5 357 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 OR2T12Q8NG77 320 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 GRIN3AQ8TCU5 1115 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 NODALQ96S42 347 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 SEMA3CQ99985 751 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 TRIM54Q9BYV2 358 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 FAIMQ9NVQ4 179 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 ADGRE2Q9UHX3 823 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 PTBP2Q9UKA9 531 aaKnown RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 PDE10AQ9Y233 779 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 C7orf72A4D263 438 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 POMCP01189 267 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 BCAP31P51572 246 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 TOP3AQ13472 1001 aaPredicted RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 VGLL4Q14135 290 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 RFTN1Q14699 578 aaPredicted RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 TMEM135Q86UB9 458 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
SEC23A-201ENST00000307712 TMEM74Q96NL1 305 aa13.44□□□□□ -0.26
SEC23A-201ENST00000307712 APOL4Q9BPW4 351 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms