RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 IL22Q9GZX6 179 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 FANCEQ9HB96 536 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 SLAMF8Q9P0V8 285 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 CIDEBQ9UHD4 219 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 ARID2Q68CP9 1835 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 SDHDO14521 159 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 RAD23AP54725 363 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 WNT3AP56704 352 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 PCBP1Q15365 356 aaKnown RBP eCLIP14.59□□□□□ -0.074e-7■■■■■ 40
PTPN9-201ENST00000306726 ZFP1Q6P2D0 407 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 SLC27A1Q6PCB7 646 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 KCTD8Q6ZWB6 473 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 FNDC5Q8NAU1 212 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 PCED1BQ96HM7 432 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 CACNA2D2Q9NY47 1150 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 CD274Q9NZQ7 290 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 DAPK2Q9UIK4 370 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 TMCO1Q9UM00 188 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 NOD1Q9Y239 953 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 HTRA2O43464 458 aaPredicted RBP14.59□□□□□ -0.07
PTPN9-201ENST00000306726 DAB2P98082 770 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 PURAQ00577 322 aaKnown RBP14.59□□□□□ -0.07
PTPN9-201ENST00000306726 PGS1Q32NB8 556 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 DUS1LQ6P1R4 473 aaKnown RBP14.59□□□□□ -0.07
PTPN9-201ENST00000306726 PIWIL3Q7Z3Z3 882 aaKnown RBP14.59□□□□□ -0.07
PTPN9-201ENST00000306726 CNTD1Q8N815 330 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 EML4Q9HC35 981 aaKnown RBP14.59□□□□□ -0.07
PTPN9-201ENST00000306726 AMBNQ9NP70 447 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 SMOXQ9NWM0 555 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 KIAA1257Q9ULG3 409 aa14.59□□□□□ -0.07
PTPN9-201ENST00000306726 TREHO43280 583 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 RSL1D1O76021 490 aaKnown RBP14.58□□□□□ -0.07
PTPN9-201ENST00000306726 CCND3P30281 292 aaPredicted RBP14.58□□□□□ -0.07
PTPN9-201ENST00000306726 KCNK10P57789 538 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 LILRA4P59901 499 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 PTPRRQ15256 657 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 SH3RF2Q8TEC5 729 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 OLFM1Q99784 485 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 ADI1Q9BV57 179 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 RNF112Q9ULX5 631 aa14.58□□□□□ -0.07
PTPN9-201ENST00000306726 MYO10Q9HD67 2058 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF195O14628 629 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 AXIN1O15169 862 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 XYLBO75191 536 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 MYL4P12829 197 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 ATP5F1P24539 256 aaPredicted RBP14.58□□□□□ -0.08
PTPN9-201ENST00000306726 CD300CQ08708 224 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 UGP2Q16851 508 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 SPESP1Q6UW49 350 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 ZC3H7AQ8IWR0 971 aaKnown RBP14.58□□□□□ -0.08
PTPN9-201ENST00000306726 GLMNQ92990 594 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF560Q96MR9 790 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 EGFL8Q99944 293 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 AKTIPQ9H8T0 292 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 ZNHIT2Q9UHR6 403 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 IPO11Q9UI26 975 aaKnown RBP14.58□□□□□ -0.08
PTPN9-201ENST00000306726 RIMS3Q9UJD0 308 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 PRPF19Q9UMS4 504 aaKnown RBP14.58□□□□□ -0.08
PTPN9-201ENST00000306726 ANGPTL3Q9Y5C1 460 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 IGKV6-21A0A0C4DH24 114 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 A8MT66 165 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 F8W810 466 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 SNX2O60749 519 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 ACADSBP45954 432 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 DGKQP52824 942 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 TAF2Q6P1X5 1199 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 FCRL2Q96LA5 508 aaPredicted RBP14.58□□□□□ -0.08
PTPN9-201ENST00000306726 HSFX1Q9UBD0 423 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 RAB26Q9ULW5 256 aa14.58□□□□□ -0.08
PTPN9-201ENST00000306726 GPR39O43194 453 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 RXRGP48443 463 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 SEPHS1P49903 392 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 CLCNKBP51801 687 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 DGKEP52429 567 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 SULT2A1Q06520 285 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 SAMD4BQ5PRF9 694 aaKnown RBP14.57□□□□□ -0.08
PTPN9-201ENST00000306726 CLEC20AQ6ZU45 233 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 TAC4Q86UU9 113 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM40Q8WWA1 233 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 GAB3Q8WWW8 586 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 PAK6Q9NQU5 681 aaPredicted RBP14.57□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM247A6NEH6 219 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 BTN3A1O00481 513 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 CD247P20963 164 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 CASP9P55211 416 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 DNASE1L3Q13609 305 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 DDR2Q16832 855 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 KLHL23Q8NBE8 558 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 OR13C4Q8NGS5 318 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 GLT1D1Q96MS3 346 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 RPRD1AQ96P16 312 aaPredicted RBP14.57□□□□□ -0.08
PTPN9-201ENST00000306726 PNPLA3Q9NST1 481 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 LIMD1Q9UGP4 676 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 MYO9BQ13459 2157 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 C17orf102A2RUQ5 167 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 UPK3BL1B0FP48 263 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 UPK3BL2E5RIL1 263 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 HS6ST1O60243 411 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 BCAS2O75934 225 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms