RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TRPV4Q9HBA0 871 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 PXMP2Q9NR77 195 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 ENTPD5O75356 428 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 OR3A3P47888 321 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 OR3A2P47893 321 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 CLCA4Q14CN2 919 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 CCNG2Q16589 344 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 PRR23BQ6ZRT6 265 aa13.4□□□□□ -0.26
TRIM56-201ENST00000306085 CCR3P51677 355 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SCGB2A2Q13296 93 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 LPAR1Q92633 364 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 MTMR10Q9NXD2 777 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 MRTO4Q9UKD2 239 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 PPP3CAQ08209 521 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SHQ1Q6PI26 577 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 KATNAL2Q8IYT4 538 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 PNPT1Q8TCS8 783 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CAVIN3Q969G5 261 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SMARCD1Q96GM5 515 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 KCNH7Q9NS40 1196 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SEC14L3Q9UDX4 400 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 POFUT2Q9Y2G5 429 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 MAGEC1O60732 1142 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 LSM8O95777 96 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SP100P23497 879 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 ADRA1DP25100 572 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 MASP1P48740 699 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 PTENP60484 403 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CCDC107Q8WV48 283 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 IDI2Q9BXS1 227 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 FAM237BA0A1B0GVD1 139 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 RXRBP28702 533 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CD86P42081 329 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 EIF5AP63241 154 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 RASGEF1BQ0VAM2 473 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 PPIL2Q13356 520 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CIDECQ96AQ7 238 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CISHQ9NSE2 258 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 RIMKLBQ9ULI2 386 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 MTHFD1P11586 935 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF782Q6ZMW2 699 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 COQ8AQ8NI60 647 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SLC39A8Q9C0K1 460 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 AASDHPPTQ9NRN7 309 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 FXYD6-FXYD2A0A087WZ82 144 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 KCNK1O00180 336 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 LTA4HP09960 611 aaKnown RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF543Q08ER8 600 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 KLHL26Q53HC5 615 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 FXYD6Q9H0Q3 95 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 FTH1P02794 183 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF697Q5TEC3 545 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 I3L521 148 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CHRNA5P30532 468 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SCGB2B2Q4G0G5 96 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 TMED8Q6PL24 325 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-201ENST00000306085 BEND5Q7L4P6 421 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 SCUBE3Q8IX30 993 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 C1orf216Q8TAB5 229 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 MAGEE1Q9HCI5 957 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 DNAJC13O75165 2243 aa13.39□□□□□ -0.27
TRIM56-201ENST00000306085 PITPNAQ00169 270 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 ADNP2Q6IQ32 1131 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 FAM83AQ86UY5 434 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 STAG3L4Q8TBR4 150 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 NDNQ99608 321 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 IGFBP5P24593 272 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 GRXCR2A6NFK2 248 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 GPRIN3Q6ZVF9 776 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 CPT1CQ8TCG5 803 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 TMEM176AQ96HP8 235 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 PRICKLE1Q96MT3 831 aaPredicted RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 RIT2Q99578 217 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 CLDN25C9JDP6 229 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 RPL21P46778 160 aaKnown RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 MTFR2Q6P444 385 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 TRIM36Q9NQ86 728 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 PDP1Q9P0J1 537 aaPredicted RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 CATP04040 527 aaKnown RBP13.38□□□□□ -0.27
TRIM56-201ENST00000306085 SERPINA4P29622 427 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 ATAD3CQ5T2N8 411 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 PPP3R2Q96LZ3 170 aa13.38□□□□□ -0.27
TRIM56-201ENST00000306085 NR2E1Q9Y466 385 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms