RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 BMPR1AP36894 532 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 RAP1GDS1P52306 607 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 ADARP55265 1226 aaKnown RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 SATB1Q01826 763 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 LMAN2Q12907 356 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 SLC9B1Q4ZJI4 515 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 GPR158Q5T848 1215 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 ACAD11Q709F0 780 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 AFAP1L2Q8N4X5 818 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 MRPL43Q8N983 215 aaKnown RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 ZNF557Q8N988 423 aaPredicted RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 LEMD2Q8NC56 503 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 MCUR1Q96AQ8 359 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 CMTM5Q96DZ9 223 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 MYO19Q96H55 970 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 LMLNQ96KR4 655 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 SLC46A2Q9BY10 475 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 CCDC68Q9H2F9 335 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 MRGBPQ9NV56 204 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 POLR3BQ9NW08 1133 aaPredicted RBP19.4■□□□□ 0.7
HOXC4-201ENST00000303406 ZDHHC2Q9UIJ5 367 aa19.4■□□□□ 0.7
HOXC4-201ENST00000303406 TRPC5OSA6NMA1 111 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 LMNAP02545 664 aaKnown RBP19.39■□□□□ 0.69
HOXC4-201ENST00000303406 HSPA8P11142 646 aaKnown RBP19.39■□□□□ 0.69
HOXC4-201ENST00000303406 IMPDH1P20839 514 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 ATP6V0D1P61421 351 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 NAA20P61599 178 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 PLEKHG6Q3KR16 790 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 VWA5B1Q5TIE3 1220 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 APCDD1Q8J025 514 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 KDM1BQ8NB78 822 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 MAPK15Q8TD08 544 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 PIH1D2Q8WWB5 315 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 CORO1BQ9BR76 489 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 TAS2R13Q9NYV9 303 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 IL17CQ9P0M4 197 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 ZMYM5Q9UJ78 669 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 ZNF711Q9Y462 761 aa19.39■□□□□ 0.69
HOXC4-201ENST00000303406 SMIM24O75264 130 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 IGSF6O95976 241 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 PYGLP06737 847 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 TPBGLP0DKB5 382 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 SP100P23497 879 aaPredicted RBP19.38■□□□□ 0.69
HOXC4-201ENST00000303406 MC4RP32245 332 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 HMGCLP35914 325 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 ABL2P42684 1182 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 EPHB1P54762 984 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 ERVFC1P60507 584 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 PDAP1Q13442 181 aaKnown RBP19.38■□□□□ 0.69
HOXC4-201ENST00000303406 SH2D4BQ5SQS7 431 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 TMEM240Q5SV17 173 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 STK40Q8N2I9 435 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 CPSF7Q8N684 471 aaKnown RBP19.38■□□□□ 0.69
HOXC4-201ENST00000303406 CCNYL1Q8N7R7 359 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 RBM15BQ8NDT2 890 aaKnown RBP19.38■□□□□ 0.69
HOXC4-201ENST00000303406 AGAP11Q8TF27 550 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 MAELQ96JY0 434 aaKnown RBP19.38■□□□□ 0.69
HOXC4-201ENST00000303406 ASB2Q96Q27 587 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 DERL2Q9GZP9 239 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 PRKAG2Q9UGJ0 569 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 FKBPLQ9UIM3 349 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 PLA2G4CQ9UP65 541 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 CDYLQ9Y232 598 aa19.38■□□□□ 0.69
HOXC4-201ENST00000303406 OAS3Q9Y6K5 1087 aaKnown RBP19.38■□□□□ 0.69
HOXC4-201ENST00000303406 LCHNA4D1U4 455 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 RHOBTB1O94844 696 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 NAA25Q14CX7 972 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 FRMD7Q6ZUT3 714 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 PIM3Q86V86 326 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 NKAPQ8N5F7 415 aaKnown RBP19.37■□□□□ 0.69
HOXC4-201ENST00000303406 SHKBP1Q8TBC3 707 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 HERVK_113Q902F9 699 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 ISG20Q96AZ6 181 aaKnown RBP19.37■□□□□ 0.69
HOXC4-201ENST00000303406 SGF29Q96ES7 293 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 PKP3Q9Y446 797 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 PCDHB9Q9Y5E1 797 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 GBF1Q92538 1859 aa19.37■□□□□ 0.69
HOXC4-201ENST00000303406 GOLGA8QA0A0J9YX86 632 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 GOLGA8OA6NCC3 632 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 GOLGA8NF8WBI6 632 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 SCAMP3O14828 347 aaKnown RBP19.36■□□□□ 0.69
HOXC4-201ENST00000303406 CCL16O15467 120 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 SRP72O76094 671 aaKnown RBP19.36■□□□□ 0.69
HOXC4-201ENST00000303406 MT-CO1P00395 513 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 SLC4A1P02730 911 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 POU2F2P09086 479 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 PKMP14618 531 aaKnown RBP19.36■□□□□ 0.69
HOXC4-201ENST00000303406 TCF3P15923 654 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 PTPN2P17706 415 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 CTNNB1P35222 781 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 PGM1P36871 562 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 PTGER3P43115 390 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 COPAP53621 1224 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 XIAPP98170 497 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 KDSRQ06136 332 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 CACNG1Q06432 222 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 BCL2L1Q07817 233 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 PEX6Q13608 980 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 ARHGAP15Q53QZ3 475 aa19.36■□□□□ 0.69
HOXC4-201ENST00000303406 ATXN7L2Q5T6C5 722 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms