RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 KCNC3Q14003 757 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 DMC1Q14565 340 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 CDKN3Q16667 212 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 TMEM215Q68D42 235 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 CCDC91Q7Z6B0 441 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 SCG3Q8WXD2 468 aaKnown RBP22.26■■□□□ 1.15
SMAD1-201ENST00000302085 MYLIPQ8WY64 445 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 LPGAT1Q92604 370 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 AARSD1Q9BTE6 412 aaKnown RBP22.26■■□□□ 1.15
SMAD1-201ENST00000302085 MRPL46Q9H2W6 279 aaKnown RBP22.26■■□□□ 1.15
SMAD1-201ENST00000302085 PNPOQ9NVS9 261 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 A0A0J9YYE9 177 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 TRBC1P01850 177 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 HNF1BP35680 557 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 HMGCLP35914 325 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 VIPR2P41587 438 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 AQP5P55064 265 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 FAM83EQ2M2I3 478 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 ACCSLQ4AC99 568 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 PSAPL1Q6NUJ1 521 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 ZNF557Q8N988 423 aaPredicted RBP22.25■■□□□ 1.15
SMAD1-201ENST00000302085 GDPD5Q8WTR4 605 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 MOCOSQ96EN8 888 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 CEP44Q9C0F1 390 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 EPOPA6NHQ4 379 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 TMEM114B3SHH9 223 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 BNIP3LO60238 219 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 HOXB8P17481 243 aaPredicted RBP22.25■■□□□ 1.15
SMAD1-201ENST00000302085 SERPINA4P29622 427 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 WEE1P30291 646 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 FMO4P31512 558 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 SULT2A1Q06520 285 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 DHCR24Q15392 516 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 CARD16Q5EG05 197 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 AGAP9Q5VTM2 703 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 LIPMQ5VYY2 423 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.25■■□□□ 1.15
SMAD1-201ENST00000302085 PIWIL2Q8TC59 973 aaKnown RBP22.25■■□□□ 1.15
SMAD1-201ENST00000302085 SREK1Q8WXA9 508 aaKnown RBP22.25■■□□□ 1.15
SMAD1-201ENST00000302085 SLC2A11Q9BYW1 496 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 DUS2Q9NX74 493 aaKnown RBP22.25■■□□□ 1.15
SMAD1-201ENST00000302085 FNDC3AQ9Y2H6 1198 aaKnown RBP22.25■■□□□ 1.15
SMAD1-201ENST00000302085 PKP3Q9Y446 797 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 CAPN7Q9Y6W3 813 aa22.25■■□□□ 1.15
SMAD1-201ENST00000302085 BPTFQ12830 3046 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 H2AFYO75367 372 aaKnown RBP22.24■■□□□ 1.15
SMAD1-201ENST00000302085 NDUFS3O75489 264 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 SUOXP51687 545 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 ZRANB3Q5FWF4 1079 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 TECRLQ5HYJ1 363 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 DPY19L3Q6ZPD9 716 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 PCDH20Q8N6Y1 951 aaKnown RBP22.24■■□□□ 1.15
SMAD1-201ENST00000302085 PPP4R1Q8TF05 950 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 SGF29Q96ES7 293 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 TUBGCP5Q96RT8 1024 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 ECT2Q9H8V3 914 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 ACSS2Q9NR19 701 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 FBXO10Q9UK96 956 aa22.24■■□□□ 1.15
SMAD1-201ENST00000302085 SERPINB3P29508 390 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 SLC26A3P40879 764 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 KPNA2P52292 529 aaKnown RBP22.23■■□□□ 1.15
SMAD1-201ENST00000302085 PRKAA2P54646 552 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 NCALDP61601 193 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 SKA1Q96BD8 255 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 CPEB1Q9BZB8 566 aaKnown RBP22.23■■□□□ 1.15
SMAD1-201ENST00000302085 LMAN2LQ9H0V9 348 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 ZFP69BQ9UJL9 534 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 ERVW-1Q9UQF0 538 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 MED16Q9Y2X0 877 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 UBA6A0AVT1 1052 aaPredicted RBP22.23■■□□□ 1.15
SMAD1-201ENST00000302085 DNAJC8O75937 253 aaPredicted RBP22.23■■□□□ 1.15
SMAD1-201ENST00000302085 POP4O95707 220 aaKnown RBP22.23■■□□□ 1.15
SMAD1-201ENST00000302085 CYP17A1P05093 508 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 MAGEA9P43362 315 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 CCNHP51946 323 aaPredicted RBP22.23■■□□□ 1.15
SMAD1-201ENST00000302085 ACAP2Q15057 778 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 GEN1Q17RS7 908 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 FAM78AQ5JUQ0 283 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 TRIM68Q6AZZ1 485 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 C10orf67Q8IYJ2 551 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 PAF1Q8N7H5 531 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 ECHDC3Q96DC8 303 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 SUV39H2Q9H5I1 410 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 SFXN1Q9H9B4 322 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 ZFYVE1Q9HBF4 777 aa22.23■■□□□ 1.15
SMAD1-201ENST00000302085 CAPN8A6NHC0 703 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 OR1I1O60431 355 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 CLDN7O95471 211 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 CISD3P0C7P0 127 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 NAGLUP54802 743 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 SETMARQ53H47 684 aaPredicted RBP22.22■■□□□ 1.15
SMAD1-201ENST00000302085 CLNKQ7Z7G1 428 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 NPAS3Q8IXF0 933 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 AHI1Q8N157 1196 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 CHST14Q8NCH0 376 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 OSCP1Q8WVF1 389 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 SORCS1Q8WY21 1168 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 BIRC8Q96P09 236 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 POPDC3Q9HBV1 291 aa22.22■■□□□ 1.15
SMAD1-201ENST00000302085 PRRC2BQ5JSZ5 2229 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms