RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 THAP5Q7Z6K1 395 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PLD3Q8IV08 490 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 NPWQ8N729 165 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TEKT5Q96M29 485 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 GPR20Q99678 358 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 HPS4Q9NQG7 708 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 U3KQV3 271 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 EP400Q96L91 3159 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF487B1APH4 448 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PPP6CO00743 305 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 HS6ST1O60243 411 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 CHEK2O96017 543 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 USP17L7P0C7H9 530 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 NKX2-5P52952 324 aaPredicted RBP11.41□□□□□ -0.58
TRUB1-201ENST00000298746 OAZ1P54368 228 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ATP6V0D1P61421 351 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 IL5RAQ01344 420 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 POU4F1Q01851 419 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TRIM32Q13049 653 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 MEP1AQ16819 746 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 HMGCLL1Q8TB92 370 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ITFG1Q8TB96 612 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TWIST2Q8WVJ9 160 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 SGCDQ92629 289 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ISL2Q96A47 359 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 HSFY1Q96LI6 401 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PPM1MQ96MI6 270 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 DDX28Q9NUL7 540 aaKnown RBP11.41□□□□□ -0.58
TRUB1-201ENST00000298746 CMTM6Q9NX76 183 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 MTRRQ9UBK8 725 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 CDH7Q9ULB5 785 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 AZIN1O14977 448 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 DYNC1LI2O43237 492 aaPredicted RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 SNX2O60749 519 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 THRBP10828 461 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CCT8P50990 548 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 APLP1P51693 650 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 TMBIM6P55061 237 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 DIO3P55073 304 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 ECT2LQ008S8 904 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 MAPRE1Q15691 268 aaKnown RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CYBRD1Q53TN4 286 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF789Q5FWF6 425 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 ADGRG5Q8IZF4 528 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 PELI3Q8N2H9 469 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 SMG8Q8ND04 991 aaKnown RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CHST13Q8NET6 341 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 SLC35B4Q969S0 331 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 EMID1Q96A84 441 aaPredicted RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 ZUFSPQ96AP4 578 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 FEM1CQ96JP0 617 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 OLFM1Q99784 485 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CXCL16Q9H2A7 254 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 MEAF6Q9HAF1 191 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 ERAP1Q9NZ08 941 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 HACD3Q9P035 362 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 TCAF1Q9Y4C2 921 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CSADQ9Y600 493 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CPQQ9Y646 472 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 SLC30A1Q9Y6M5 507 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 LRRC14BA6NHZ5 514 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 FAM155AB1AL88 458 aaPredicted RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 PSMD11O00231 422 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 MBL2P11226 248 aaPredicted RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 POLR2IP36954 125 aaKnown RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 HPCAL1P37235 193 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CXCR3P49682 368 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 ATP6AP1Q15904 470 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 GLYATQ6IB77 296 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 FAM117BQ6P1L5 589 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 SLC2A7Q6PXP3 512 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 DNAJC14Q6Y2X3 702 aaPredicted RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 MICU2Q8IYU8 434 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 CENPIQ92674 756 aaPredicted RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF347Q96SE7 839 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 THUMPD3Q9BV44 507 aaKnown RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 FUNDC2Q9BWH2 189 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 HACL1Q9UJ83 578 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 USP22Q9UPT9 525 aa11.4□□□□□ -0.58
TRUB1-201ENST00000298746 TIMM13Q9Y5L4 95 aaPredicted RBP11.4□□□□□ -0.58
TRUB1-201ENST00000298746 SHROOM3Q8TF72 1996 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 BBIP1A8MTZ0 92 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 PFDN6O15212 129 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 ALDOCP09972 364 aaKnown RBP11.4□□□□□ -0.59
TRUB1-201ENST00000298746 TGFB3P10600 412 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 SLC6A2P23975 617 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 RFC2P35250 354 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 IDUAP35475 653 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 PLA2G16P53816 162 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 IST1P53990 364 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 KCTD2Q14681 263 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 PAFAH1B3Q15102 231 aaKnown RBP11.4□□□□□ -0.59
TRUB1-201ENST00000298746 RBBP7Q16576 425 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 THOC7Q6I9Y2 204 aaKnown RBP11.4□□□□□ -0.59
TRUB1-201ENST00000298746 CATSPERGQ6ZRH7 1159 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 PRR23BQ6ZRT6 265 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 PIM3Q86V86 326 aa11.4□□□□□ -0.59
TRUB1-201ENST00000298746 FUNDC1Q8IVP5 155 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms