RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 BMP1P13497 986 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 DNAJB1P25685 340 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 GGT5P36269 586 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 NDST2P52849 883 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 FASTKQ14296 549 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CILP2Q8IUL8 1156 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 UMODL1-AS1Q8N2C9 162 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 LRRC43Q8N309 656 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF366Q8N895 744 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 ACOX2Q99424 681 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 WDR41Q9HAD4 459 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 EFCAB1Q9HAE3 211 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 EML4Q9HC35 981 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CDH22Q9UJ99 828 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 MCM8Q9UJA3 840 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 TRMT6Q9UJA5 497 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 TRAF6Q9Y4K3 522 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 NPEPPSL1A6NEC2 478 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CSF2RAP15509 400 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 NELFEP18615 380 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 ARCN1P48444 511 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 EPHB3P54753 998 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 IL10RBQ08334 325 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 PTK2BQ14289 1009 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CBX2Q14781 532 aaPredicted RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 KIAA0930Q6ICG6 404 aaPredicted RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 PAOXQ6QHF9 649 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 BNC2Q6ZN30 1099 aaPredicted RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 FAM43BQ6ZT52 329 aaPredicted RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 RBM23Q86U06 439 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CPNE9Q8IYJ1 553 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 DSELQ8IZU8 1212 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 FBXO39Q8N4B4 442 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 CDYL2Q8N8U2 506 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 OR13J1Q8NGT2 312 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 SERPINI1Q99574 410 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 DRC3Q9H069 523 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 TMEM248Q9NWD8 314 aa9.3□□□□□ -0.92
PRDM9-201ENST00000296682 RANBP2P49792 3224 aaKnown RBP9.3□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF840PA6NDX5 716 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 FFAR3O14843 346 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 GPR42O15529 346 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 DNAJA2O60884 412 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 LRG1P02750 347 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 AGTR2P50052 363 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 DEFB103AP81534 67 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 KLC1Q07866 573 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 BHLHE22Q8NFJ8 381 aaPredicted RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 SIKE1Q9BRV8 207 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 MRPL9Q9BYD2 267 aaKnown RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 PFDN4Q9NQP4 134 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 VPS45Q9NRW7 570 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 TAS2R13Q9NYV9 303 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CFAP97Q9P2B7 532 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 EGFL7Q9UHF1 273 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 ZNHIT2Q9UHR6 403 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 ANKRD6Q9Y2G4 727 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 C1orf232A0A0U1RR37 186 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 RGSL1A5PLK6 1076 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 PABPN1LA6NDY0 278 aaKnown RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 AXIN1O15169 862 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CCL16O15467 120 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 INSIG1O15503 277 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 ITGAXP20702 1163 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 PAX7P23759 505 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 EEF1DP29692 281 aaKnown RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 HOXC13P31276 330 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 PSEN1P49768 467 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CLCN5P51795 746 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 POLE2P56282 527 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CAPRIN1Q14444 709 aaKnown RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 NRF1Q16656 503 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 TRMT5Q32P41 509 aaKnown RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 PARP15Q460N3 678 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 KDELC1Q6UW63 502 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 EPGNQ6UW88 154 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 STYXQ8WUJ0 223 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 MRPS31Q92665 395 aaKnown RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 SLC39A13Q96H72 371 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF558Q96NG5 402 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CD84Q9UIB8 345 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CRLS1Q9UJA2 301 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 POMPQ9Y244 141 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 YIPF1Q9Y548 306 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 A0A1W2PQ67 120 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CAPN14A8MX76 684 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 PSMD12O00232 456 aaPredicted RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 MATN2O00339 956 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 KIF3CO14782 793 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 HOXA2O43364 376 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 STC2O76061 302 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 NDST3O95803 873 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 S1PR4O95977 384 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 GNAZP19086 355 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 RAD51Q06609 339 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 COL9A2Q14055 689 aaPredicted RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 SEMA3AQ14563 771 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CAPRIN2Q6IMN6 1127 aaKnown RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 DNAJC14Q6Y2X3 702 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms