RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ITPKAP23677 461 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 GNA12Q03113 381 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 ZBTB2Q8N680 514 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 WDR36Q8NI36 951 aaKnown RBP17.22■□□□□ 0.35
CDCP1-201ENST00000296129 REXO5Q96IC2 774 aaKnown RBP17.22■□□□□ 0.35
CDCP1-201ENST00000296129 ITCHQ96J02 903 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 KCNE2Q9Y6J6 123 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 H0Y858 1186 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 ENO2P09104 434 aaPredicted RBP17.22■□□□□ 0.35
CDCP1-201ENST00000296129 NMBRP28336 390 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 TALDO1P37837 337 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 ARHGAP1Q07960 439 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 PRSS55Q6UWB4 352 aaPredicted RBP17.22■□□□□ 0.35
CDCP1-201ENST00000296129 STYXQ8WUJ0 223 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 STBD1O95210 358 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 IFNA16P05015 189 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 RPL3P39023 403 aaKnown RBP17.22■□□□□ 0.35
CDCP1-201ENST00000296129 RTKNQ9BST9 563 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 KLHL1Q9NR64 748 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 AASDHPPTQ9NRN7 309 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 COQ4Q9Y3A0 265 aa17.22■□□□□ 0.35
CDCP1-201ENST00000296129 TRAFD1O14545 582 aaPredicted RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 JAG1P78504 1218 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 CACNG1Q06432 222 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 SLC9A5Q14940 896 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 ZDHHC20Q5W0Z9 365 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 RTL3Q8N8U3 475 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 C19orf18Q8NEA5 215 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 RHOBTB2Q9BYZ6 727 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 SLC25A51Q9H1U9 297 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 MFSD1Q9H3U5 465 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 PCDHB1Q9Y5F3 818 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 MT-CYBP00156 380 aaPredicted RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 RPL17P18621 184 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 HTR1BP28222 390 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 SPESP1Q6UW49 350 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 CPNE8Q86YQ8 564 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 OR4A15Q8NGL6 344 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 RNFT2Q96EX2 444 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 DEPDC7Q96QD5 511 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 MIR1-1HGQ9H1L0 117 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 GSAPA4D1B5 854 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 INHAP05111 366 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 COL6A2P12110 1019 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 YBEYP58557 167 aaPredicted RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 SOWAHAQ2M3V2 549 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 KHDRBS2Q5VWX1 349 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 EIF3MQ7L2H7 374 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 AMIGO3Q86WK7 504 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 PCDH19Q8TAB3 1148 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 TBATAQ96M53 351 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 GPR21Q99679 349 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 EGFL7Q9UHF1 273 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 VIRMAQ69YN4 1812 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 SLC38A8A6NNN8 435 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 YJEFN3A6XGL0 299 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 TSPAN19P0C672 248 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 SPAM1P38567 509 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 IDH2P48735 452 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 CAMKK1Q8N5S9 505 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 C19orf60Q96EN9 201 aa17.21■□□□□ 0.35
CDCP1-201ENST00000296129 FCF1Q9Y324 198 aaKnown RBP17.21■□□□□ 0.35
CDCP1-201ENST00000296129 A0A0J9YYE9 177 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 TK2O00142 265 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 RFXANKO14593 260 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 CBX2Q14781 532 aaPredicted RBP17.2■□□□□ 0.34
CDCP1-201ENST00000296129 TRMOQ9BU70 441 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 CD84Q9UIB8 345 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 DHX15O43143 795 aaKnown RBP17.2■□□□□ 0.34
CDCP1-201ENST00000296129 KRT75O95678 551 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 CST1P01037 141 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 NDST2P52849 883 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 ZYG11AQ6WRX3 759 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 OFCC1Q8IZS5 231 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 RERGQ96A58 199 aaPredicted RBP17.2■□□□□ 0.34
CDCP1-201ENST00000296129 TLE6Q9H808 572 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 KCTD5Q9NXV2 234 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 ZNF180Q9UJW8 692 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 FZD9O00144 591 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 LGR5O75473 907 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 TGDSO95455 350 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 EOMESO95936 686 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 DNTTP04053 509 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 LIMK2P53671 638 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 CSNK2BP67870 215 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 OR10G6Q8NH81 332 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 TBC1D14Q9P2M4 693 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 CACNG4Q9UBN1 327 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 SLC7A2P52569 658 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 TRIM25Q14258 630 aaKnown RBP17.2■□□□□ 0.34
CDCP1-201ENST00000296129 ZNHIT3Q15649 155 aaPredicted RBP17.2■□□□□ 0.34
CDCP1-201ENST00000296129 AMIGO2Q86SJ2 522 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
CDCP1-201ENST00000296129 BPIFB6Q8NFQ5 453 aa17.2■□□□□ 0.34
CDCP1-201ENST00000296129 CLHC1Q8NHS4 586 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms