RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 NRROSQ86YC3 692 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 SLITRK4Q8IW52 837 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ARHGAP12Q8IWW6 846 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ARFGAP1Q8N6T3 406 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 C3orf20Q8ND61 904 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 RCBTB1Q8NDN9 531 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 OR56A4Q8NGH8 313 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 PATE1Q8WXA2 126 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 PMEPA1Q969W9 287 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 DPEP2Q9H4A9 486 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 CATSPERBQ9H7T0 1116 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 STARD5Q9NSY2 213 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 SEPT11Q9NVA2 429 aaKnown RBP9.31□□□□□ -0.92
CNOT9-202ENST00000295701 TAS2R14Q9NYV8 317 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 IL17BQ9UHF5 180 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ACSL6Q9UKU0 697 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ST14Q9Y5Y6 855 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 MAST4O15021 2626 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 NBASA2RRP1 2371 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 A0A0U1RQS6 177 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 TMX2-CTNND1H3BSU7 103 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 CACNB4O00305 520 aaPredicted RBP9.3□□□□□ -0.92
CNOT9-202ENST00000295701 PALMO75781 387 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 FGF1P05230 155 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 CALB1P05937 261 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 ELFN1P0C7U0 828 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 EEF1GP26641 437 aaKnown RBP9.3□□□□□ -0.92
CNOT9-202ENST00000295701 AK4P27144 223 aaPredicted RBP9.3□□□□□ -0.92
CNOT9-202ENST00000295701 TRIM23P36406 574 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 KIAA1024LP59773 190 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 SRSF11Q05519 484 aaKnown RBP9.3□□□□□ -0.92
CNOT9-202ENST00000295701 ARHGEF7Q14155 803 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 SYCP1Q15431 976 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 DBN1Q16643 649 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 CFAP58Q5T655 872 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 CDKAL1Q5VV42 579 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 AFMIDQ63HM1 303 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 PNCKQ6P2M8 343 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 DNAJC24Q6P3W2 148 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 BRAT1Q6PJG6 821 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 DTX1Q86Y01 620 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 NPWQ8N729 165 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 OR6C4Q8NGE1 309 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 ECHDC3Q96DC8 303 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 ZNF641Q96N77 438 aaPredicted RBP9.3□□□□□ -0.92
CNOT9-202ENST00000295701 PEBP4Q96S96 227 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 AGPAT1Q99943 283 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 NUDT22Q9BRQ3 303 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 CNPY3Q9BT09 278 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 DHX35Q9H5Z1 703 aaKnown RBP9.3□□□□□ -0.92
CNOT9-202ENST00000295701 FANCLQ9NW38 375 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 PCSK1NQ9UHG2 260 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 AP4E1Q9UPM8 1137 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 PLEKHM1Q9Y4G2 1056 aa9.3□□□□□ -0.92
CNOT9-202ENST00000295701 HEMK1Q9Y5R4 338 aaPredicted RBP9.3□□□□□ -0.92
CNOT9-202ENST00000295701 RELNP78509 3460 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 PRSS38A1L453 326 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ARHGAP42A6NI28 874 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 TMCO5BA8MYB1 307 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 DFFAO00273 331 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 EEF2KO00418 725 aaKnown RBP9.29□□□□□ -0.92
CNOT9-202ENST00000295701 TRAFD1O14545 582 aaPredicted RBP9.29□□□□□ -0.92
CNOT9-202ENST00000295701 SUV39H1O43463 412 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 PNLIPP16233 465 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ERCC2P18074 760 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 MPSTP25325 297 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ALDH4A1P30038 563 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 CSNK1DP48730 415 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 POLD2P49005 469 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 CSRP3P50461 194 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 SCNN1BP51168 640 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 NDST2P52849 883 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 COPB1P53618 953 aaKnown RBP9.29□□□□□ -0.92
CNOT9-202ENST00000295701 BCL2L1Q07817 233 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 GRM3Q14832 879 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ACOX1Q15067 660 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 NKAIN2Q5VXU1 208 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 DENND2CQ68D51 928 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ACAD10Q6JQN1 1059 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 RFLNAQ6ZTI6 216 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 DPPA4Q7L190 304 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 MCOLN2Q8IZK6 566 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ATL2Q8NHH9 583 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ENOX1Q8TC92 643 aaKnown RBP9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 COQ10AQ96MF6 247 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 TUBGCP5Q96RT8 1024 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 CMKLR1Q99788 373 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 TRIM7Q9C029 511 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 NUP62CLQ9H1M0 184 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 ATP13A3Q9H7F0 1226 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 CARS2Q9HA77 564 aaKnown RBP9.29□□□□□ -0.92
CNOT9-202ENST00000295701 TIMMDC1Q9NPL8 285 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 B4GALT6Q9UBX8 382 aa9.29□□□□□ -0.92
CNOT9-202ENST00000295701 PTPN13Q12923 2485 aa9.28□□□□□ -0.92
CNOT9-202ENST00000295701 TRBV23OR9-2A0A075B6M9 112 aa9.28□□□□□ -0.92
CNOT9-202ENST00000295701 IGHV5-10-1A0A0J9YXX1 117 aa9.28□□□□□ -0.92
CNOT9-202ENST00000295701 CFAP69A5D8W1 941 aa9.28□□□□□ -0.92
CNOT9-202ENST00000295701 TNFRSF10CO14798 259 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms