RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 NR5A2O00482 541 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 BUB1BO60566 1050 aaPredicted RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 ZPR1O75312 459 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 MBD3O95983 291 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 APOEP02649 317 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 LYNP07948 512 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 CYC1P08574 325 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 AKR1A1P14550 325 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 ITPKAP23677 461 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 GTF2H1P32780 548 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 MSX2P35548 267 aaPredicted RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 GCKP35557 465 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 TPM4P67936 248 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 SCN1BQ07699 218 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 GOLGA8FQ08AF8 430 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 GOLGA8DPQ0D2H9 430 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 SRSF5Q13243 272 aaKnown RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 BCL7AQ4VC05 210 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 GLE1Q53GS7 698 aaKnown RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 WSCD1Q658N2 575 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 APOBEC3HQ6NTF7 200 aaKnown RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 FOXR2Q6PJQ5 311 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 RSPO2Q6UXX9 243 aaPredicted RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 PHF13Q86YI8 300 aaPredicted RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 COMMD1Q8N668 190 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 C12orf50Q8NA57 414 aaPredicted RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 KYQ8NBH2 561 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 POGLUT1Q8NBL1 392 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 RLN3Q8WXF3 142 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 LCORQ96JN0 433 aaPredicted RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 NSMCE3Q96MG7 304 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 TEFMQ96QE5 360 aaKnown RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 TGS1Q96RS0 853 aaKnown RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 PRRT1Q99946 306 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 MXRA8Q9BRK3 442 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 GON7Q9BXV9 100 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 RMND5AQ9H871 391 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 POT1Q9NUX5 634 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 RBAKQ9NYW8 714 aaPredicted RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 KLHL3Q9UH77 587 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 NAGKQ9UJ70 344 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 TRMT6Q9UJA5 497 aaKnown RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 GMEB2Q9UKD1 530 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 NSFL1CQ9UNZ2 370 aaKnown RBP3.3□□□□□ -1.88
DMD-201ENST00000288447 RWDD3Q9Y3V2 267 aa3.3□□□□□ -1.88
DMD-201ENST00000288447 PNMA6EA0A0J9YXQ4 647 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 SNTNA6NMZ2 147 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 RHPN2P1A8MT19 583 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 PRR33A8MZF0 331 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 H7C4K7 107 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 PPIP5K2O43314 1243 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 TBX19O60806 448 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 SCAF4O95104 1147 aaKnown RBP3.29□□□□□ -1.88
DMD-201ENST00000288447 NDUFB10O96000 172 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 IFNGP01579 166 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 YES1P07947 543 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 OR4E1P0C645 316 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 CCNYL3P0C7X3 344 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 CLUP10909 449 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 C5AR1P21730 350 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 AHCYP23526 432 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 RPA1P27694 616 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 PPP2R1AP30153 589 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 ACTR1BP42025 376 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 DGKEP52429 567 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 RELAQ04206 551 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 ZMYND11Q15326 602 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 SMAD2Q15796 467 aaKnown RBP3.29□□□□□ -1.88
DMD-201ENST00000288447 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.29□□□□□ -1.88
DMD-201ENST00000288447 ZNF658BQ4V348 819 aaPredicted RBP3.29□□□□□ -1.88
DMD-201ENST00000288447 HAUS3Q68CZ6 603 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 CAVIN1Q6NZI2 390 aaKnown RBP3.29□□□□□ -1.88
DMD-201ENST00000288447 CDC73Q6P1J9 531 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 NXPE4Q6UWF7 544 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 CES3Q6UWW8 571 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 RIPOR1Q6ZS17 1223 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 SYT13Q7L8C5 426 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 DCXRQ7Z4W1 244 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 ATCAYQ86WG3 371 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 OXR1Q8N573 874 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 IL17RCQ8NAC3 791 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 ICA1LQ8NDH6 482 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 PPP1R35Q8TAP8 253 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 UBLCP1Q8WVY7 318 aaPredicted RBP3.29□□□□□ -1.88
DMD-201ENST00000288447 SUSD6Q92537 303 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 ESR2Q92731 530 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 GFM2Q969S9 779 aaKnown RBP3.29□□□□□ -1.88
DMD-201ENST00000288447 HAVCR1Q96D42 359 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 MTBPQ96DY7 904 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 SAMD8Q96LT4 415 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 CCDC140Q96MF4 163 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 ZNF578Q96N58 590 aaPredicted RBP3.29□□□□□ -1.88
DMD-201ENST00000288447 NECTIN4Q96NY8 510 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 FAM110AQ9BQ89 295 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 C1QTNF2Q9BXJ5 285 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 ZYG11BQ9C0D3 744 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 PCED1AQ9H1Q7 454 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 PDZD7Q9H5P4 517 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 OPA3Q9H6K4 179 aa3.29□□□□□ -1.88
DMD-201ENST00000288447 TREM1Q9NP99 234 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms