RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ATXN1LP0C7T5 689 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 ALPPL2P10696 532 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 ETS1P14921 441 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 JUNDP17535 347 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 TCP1P17987 556 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 KELP23276 732 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 STIP1P31948 543 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 GRK6P43250 576 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 KCNJ1P48048 391 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 VPS41P49754 854 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 BLKP51451 505 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 STC1P52823 247 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PFN3P60673 137 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 HNRNPKP61978 463 aaKnown RBP eCLIP6.52□□□□□ -1.37
CD44-204ENST00000279452 YPEL5P62699 121 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PPARDQ03181 441 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 BNIP3Q12983 259 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 SLC14A1Q13336 389 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 FZD2Q14332 565 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 NFATC4Q14934 902 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 TRIP13Q15645 432 aaPredicted RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 SLC1A5Q15758 541 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 CCNG2Q16589 344 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 KCTD19Q17RG1 926 aaPredicted RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 PARP6Q2NL67 630 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 TPRG1LQ5T0D9 272 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 ESRP1Q6NXG1 681 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 PNCKQ6P2M8 343 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 KDELC1Q6UW63 502 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 MACC1Q6ZN28 852 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 RFLNAQ6ZTI6 216 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 MARK2Q7KZI7 788 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 PRUNE1Q86TP1 453 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 TRIM74Q86UV6 250 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PHACTR4Q8IZ21 702 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 RBFAQ8N0V3 343 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 EID2Q8N6I1 236 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PDCD7Q8N8D1 485 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 DNAAF3Q8N9W5 541 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 OR56A4Q8NGH8 313 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 GDAP1Q8TB36 358 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 COG1Q8WTW3 980 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 TSACCQ96A04 125 aaPredicted RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 MAGOHBQ96A72 148 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 PDXPQ96GD0 296 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 SRPK1Q96SB4 655 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 SPATA16Q9BXB7 569 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 ABCG8Q9H221 673 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 LRRC40Q9H9A6 602 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 USP29Q9HBJ7 922 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 MAGEE1Q9HCI5 957 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 RAB6BQ9NRW1 208 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 HOMER3Q9NSC5 361 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PIH1D1Q9NWS0 290 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 KCTD5Q9NXV2 234 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PAK5Q9P286 719 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 FTSJ1Q9UET6 329 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 SNX12Q9UMY4 172 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 BTBD3Q9Y2F9 522 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 ZKSCAN5Q9Y2L8 839 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PKP3Q9Y446 797 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 SPO11Q9Y5K1 396 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 MYO18AQ92614 2054 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 WDFY4Q6ZS81 3184 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 SHROOM3Q8TF72 1996 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 SPAARA0A1B0GVQ0 90 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 LOC285095A0A1B0GVY8 99 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 CCDC78A2IDD5 438 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 NEMP2A6NFY4 417 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 C10orf142B7Z368 130 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 TOR1BO14657 336 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 GIPC1O14908 333 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 AURKAO14965 403 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 STX7O15400 261 aaKnown RBP6.51□□□□□ -1.37
CD44-204ENST00000279452 PSMD3O43242 534 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 AQP9O43315 295 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 PIAS2O75928 621 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 KCNK5O95279 499 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 TNFP01375 233 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 PYGLP06737 847 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 APRTP07741 180 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 ZSCAN5DPP0CG00 497 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 ZNF883P0CG24 379 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 MYCLP1P12525 358 aaPredicted RBP6.51□□□□□ -1.37
CD44-204ENST00000279452 CD59P13987 128 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 NME1P15531 152 aaKnown RBP6.51□□□□□ -1.37
CD44-204ENST00000279452 GM2AP17900 193 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 CASQ1P31415 396 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 FDFT1P37268 417 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 GNPDA1P46926 289 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 SPINT3P49223 89 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 KIAA1024LP59773 190 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 SRP54P61011 504 aaKnown RBP6.51□□□□□ -1.37
CD44-204ENST00000279452 SIM1P81133 766 aaPredicted RBP6.51□□□□□ -1.37
CD44-204ENST00000279452 TMPRSS15P98073 1019 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 DAB2P98082 770 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 CDK3Q00526 305 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 PTSQ03393 145 aa6.51□□□□□ -1.37
CD44-204ENST00000279452 EIF2B5Q13144 721 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms