RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 LEFTY2O00292 366 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 DCXO43602 365 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 MOSPD3O75425 235 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 CD1DP15813 335 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 NCF2P19878 526 aaPredicted RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 ATP5F1P24539 256 aaPredicted RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 PSMA3P25788 255 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 FMO4P31512 558 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 OR4D1Q15615 310 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 MRPS31Q92665 395 aaKnown RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 AARSD1Q9BTE6 412 aaKnown RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 EVLQ9UI08 416 aaPredicted RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 MID2Q9UJV3 735 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 G3BP2Q9UN86 482 aaKnown RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 XIRP2A4UGR9 3374 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 UBFD1O14562 309 aaKnown RBP23.12■■□□□ 1.29
RAB40B-201ENST00000269347 EFCAB14O75071 495 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 CRTAMO95727 393 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 LSM12Q3MHD2 195 aaKnown RBP23.12■■□□□ 1.29
RAB40B-201ENST00000269347 INO80DQ53TQ3 878 aaPredicted RBP23.12■■□□□ 1.29
RAB40B-201ENST00000269347 ASTLQ6HA08 431 aaPredicted RBP23.12■■□□□ 1.29
RAB40B-201ENST00000269347 FAM45BPQ6NSW5 357 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 ZNF783Q6ZMS7 281 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 FAM45AQ8TCE6 357 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 MYLIPQ8WY64 445 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 RPL10LQ96L21 214 aaKnown RBP23.12■■□□□ 1.29
RAB40B-201ENST00000269347 BIRC8Q96P09 236 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 FAM50BQ9Y247 325 aa23.12■■□□□ 1.29
RAB40B-201ENST00000269347 ARIH1Q9Y4X5 557 aaPredicted RBP23.12■■□□□ 1.29
RAB40B-201ENST00000269347 UBA6A0AVT1 1052 aaPredicted RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 H2AFYO75367 372 aaKnown RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 ZNF37AP17032 561 aaPredicted RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 SP100P23497 879 aaPredicted RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 STK19P49842 368 aaPredicted RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 PRKAA2P54646 552 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 SLC25A3Q00325 362 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 PDCD2Q16342 344 aaPredicted RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 ACCSLQ4AC99 568 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 AGAP9Q5VTM2 703 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 MRNIPQ6NTE8 343 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 ZSWIM9Q86XI8 627 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 CMTM8Q8IZV2 173 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 DCAF4L2Q8NA75 395 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 MARK4Q96L34 752 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 TNKS2Q9H2K2 1166 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 PPP6CO00743 305 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 SORBS2O94875 1100 aaKnown RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 OGNP20774 298 aaKnown RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 MC4RP32245 332 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 IRS1P35568 1242 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 SUOXP51687 545 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 SEMG2Q02383 582 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 ACAP2Q15057 778 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 SLC5A9Q2M3M2 681 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 LMNTD2Q8IXW0 634 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 RYBPQ8N488 228 aaPredicted RBP23.11■■□□□ 1.29
RAB40B-201ENST00000269347 PIH1D2Q8WWB5 315 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 EXT2Q93063 718 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 TUBB6Q9BUF5 446 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 NCKIPSDQ9NZQ3 722 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 ASB3Q9Y575 518 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 SZT2Q5T011 3432 aa23.11■■□□□ 1.29
RAB40B-201ENST00000269347 LOC100653049A0A140TA62 436 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 HNRNPCL1O60812 293 aaKnown RBP23.1■■□□□ 1.29
RAB40B-201ENST00000269347 KRT34O76011 436 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 IPO13O94829 963 aaKnown RBP23.1■■□□□ 1.29
RAB40B-201ENST00000269347 SULT2A1Q06520 285 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 KHDC1Q4VXA5 237 aaKnown RBP23.1■■□□□ 1.29
RAB40B-201ENST00000269347 FBXO48Q5FWF7 155 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 DGKKQ5KSL6 1271 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 PAQR3Q6TCH7 311 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 LYSMD3Q7Z3D4 306 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 TSPAN17Q96FV3 270 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 LMLNQ96KR4 655 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 GSTO2Q9H4Y5 243 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 FIS1Q9Y3D6 152 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 HDAC3O15379 428 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 FGBP02675 491 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 MTHFD2P13995 350 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 LPOP22079 712 aaPredicted RBP23.1■■□□□ 1.29
RAB40B-201ENST00000269347 ERFP50548 548 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 DNAJB13P59910 316 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 XIAPP98170 497 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 PRKAA1Q13131 559 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 RALGPS1Q5JS13 557 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 CTSL3PQ5NE16 218 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 TMEM240Q5SV17 173 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 TCF7L2Q9NQB0 619 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 SH3BP1Q9Y3L3 701 aa23.1■■□□□ 1.29
RAB40B-201ENST00000269347 TRANK1O15050 2925 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 CCDC189A1A4V9 331 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 CCND1P24385 295 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 PMLP29590 882 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 NTHL1P78549 312 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 CAMK1Q14012 370 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 KPNB1Q14974 876 aaKnown RBP23.09■■□□□ 1.29
RAB40B-201ENST00000269347 CFAP157Q5JU67 520 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 SH2D4BQ5SQS7 431 aa23.09■■□□□ 1.29
RAB40B-201ENST00000269347 SEL1L3Q68CR1 1132 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms