RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 ELMO1Q92556 727 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SKA1Q96BD8 255 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 LMAN2LQ9H0V9 348 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CAB39LQ9H9S4 337 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZFP14Q9HCL3 533 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PCDH12Q9NPG4 1184 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SMPD3Q9NY59 655 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PTTG2Q9NZH5 202 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ADGRE2Q9UHX3 823 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SLC12A4Q9UP95 1085 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SCAF8Q9UPN6 1271 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 hCG_1818297A0A087WSY0 165 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 OR14I1A6ND48 311 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RIIAD1A6NNX1 92 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FAM86B1E9PN63 330 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SLITRK3O94933 977 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RLN1P04808 185 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FAM86B2P0C5J1 330 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 GSTT2BP0CG30 244 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PITPNAQ00169 270 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SULT2A1Q06520 285 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PGAM4Q8N0Y7 254 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZYG11BQ9C0D3 744 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RHOJQ9H4E5 214 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 DHX33Q9H6R0 707 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 INTS10Q9NVR2 710 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ASTN1O14525 1302 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SVILO95425 2214 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 AP5Z1O43299 807 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ORC5O43913 435 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 OR5F1O95221 314 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PAPSS2O95340 614 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BMP7P18075 431 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RPL4P36578 427 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ELP6Q0PNE2 266 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 GCNT6Q5T4J0 391 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SPESP1Q6UW49 350 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZYG11AQ6WRX3 759 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ADAM32Q8TC27 787 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ROPN1LQ96C74 230 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RCN3Q96D15 328 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RCOR3Q9P2K3 495 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SUCOQ9UBS9 1254 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MKLN1Q9UL63 735 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 NCKAP1Q9Y2A7 1128 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MAN2B2Q9Y2E5 1009 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 POLR3HQ9Y535 204 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PEX16Q9Y5Y5 336 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ITGA3P26006 1051 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ADSLP30566 484 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 HNRNPH3P31942 346 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RARRES1P49788 294 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ACTR3P61158 418 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MED22Q15528 200 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BMT2Q1RMZ1 405 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF730Q6ZMV8 503 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BTN2A1Q7KYR7 527 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 THAP5Q7Z6K1 395 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 JAZF1Q86VZ6 243 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CSGALNACT1Q8TDX6 532 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TMCO6Q96DC7 493 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 OSMRQ99650 979 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CHST7Q9NS84 486 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RPTORQ8N122 1335 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ARHGEF33A8MVX0 844 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 KCNK1O00180 336 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ADAMDEC1O15204 470 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 NRP2O60462 931 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PGRP06401 933 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TUFMP49411 452 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RPL26P61254 145 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RIPPLY1Q0D2K3 151 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FAM171A1Q5VUB5 890 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SLC30A10Q6XR72 485 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 KBTBD2Q8IY47 623 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RASGEF1CQ8N431 466 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PTGR2Q8N8N7 351 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FCRL4Q96PJ5 515 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MGME1Q9BQP7 344 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CIPCQ9C0C6 399 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 IL17RBQ9NRM6 502 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 LGALS13Q9UHV8 139 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 GNEQ9Y223 722 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 E7ENX8 843 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 H3BRB1 525 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RFXANKO14593 260 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 GSC2O15499 205 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PSIP1O75475 530 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZMPSTE24O75844 475 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 GATBO75879 557 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZBTB7AO95365 584 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ERCC2P18074 760 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 LPOP22079 712 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PTPN5P54829 565 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RPL38P63173 70 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MYBPC1Q00872 1141 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MPPE1Q53F39 396 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 LACTB2Q53H82 288 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms