RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 AKTIPQ9H8T0 292 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 OLA1Q9NTK5 396 aaKnown RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 POLR3BQ9NW08 1133 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 PCDHB5Q9Y5E4 795 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 SNX13Q9Y5W8 968 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 EPOP01588 193 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 CHRM1P11229 460 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF37AP17032 561 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 YBEYP58557 167 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 CREB5Q02930 508 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 MFSD14CQ5VZR4 134 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF549Q6P9A3 640 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 CYP2R1Q6VVX0 501 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 DHFR2Q86XF0 187 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 FUNDC1Q8IVP5 155 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 SH3RF2Q8TEC5 729 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 DDI1Q8WTU0 396 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 HHIPL1Q96JK4 782 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF597Q96LX8 424 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 COQ10BQ9H8M1 238 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 MID1IP1Q9NPA3 183 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 ARL5AQ9Y689 179 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 A0A0J9YYE9 177 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 CLGNO14967 610 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 RPP40O75818 363 aaKnown RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 CDK14O94921 469 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 CSPG5O95196 566 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 RTN3O95197 1032 aaPredicted RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 TBX18O95935 607 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 ALDOCP09972 364 aaKnown RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 ATP6V1B1P15313 513 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 GPX3P22352 226 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 SUOXP51687 545 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 SLC7A2P52569 658 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF235Q14590 738 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 C6orf10Q5SRN2 563 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 ISLR2Q6UXK2 745 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 SLCO4A1Q96BD0 722 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 DNAJC1Q96KC8 554 aaKnown RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 HOPXQ9BPY8 73 aaPredicted RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 OSBPL11Q9BXB4 747 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 SLC2A11Q9BYW1 496 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 GABRQQ9UN88 632 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 NOD1Q9Y239 953 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 AZIN1O14977 448 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 B4GALT3O60512 393 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 SREBF2Q12772 1141 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 IKBKEQ14164 716 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 PFKFB4Q16877 469 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 NADK2Q4G0N4 442 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 IRAK1BP1Q5VVH5 260 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 RBM44Q6ZP01 1051 aaKnown RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 OR4L1Q8NH43 312 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 NMD3Q96D46 503 aaKnown RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 UHRF1Q96T88 793 aaPredicted RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 TFB2MQ9H5Q4 396 aaKnown RBP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 CATSPERZQ9NTU4 200 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
HOXD3-201ENST00000249440 IL37Q9NZH6 218 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 MARCH2Q9P0N8 246 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 PADI4Q9UM07 663 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 NDUFAF1Q9Y375 327 aa16.4■□□□□ 0.22
HOXD3-201ENST00000249440 FAM92AA1XBS5 289 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 CCDC162PA2VCL2 907 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 CA12O43570 354 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 SIX3O95343 332 aaPredicted RBP16.39■□□□□ 0.21
HOXD3-201ENST00000249440 MAGEA11P43364 429 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 OR1G1P47890 313 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 MAPKAPK2P49137 400 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 NKX3-2P78367 333 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 TIAL1Q01085 375 aaKnown RBP eCLIP16.39■□□□□ 0.21
HOXD3-201ENST00000249440 DSC1Q08554 894 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 NOGQ13253 232 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 ADRM1Q16186 407 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 METTL25Q8N6Q8 603 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 TWIST2Q8WVJ9 160 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 FBXO32Q969P5 355 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 PPWD1Q96BP3 646 aaKnown RBP16.39■□□□□ 0.21
HOXD3-201ENST00000249440 GRIP2Q9C0E4 1043 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 SYTL2Q9HCH5 934 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 TLR8Q9NR97 1041 aaKnown RBP16.39■□□□□ 0.21
HOXD3-201ENST00000249440 RIMKLBQ9ULI2 386 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 C7orf72A4D263 438 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 UBXN8O00124 270 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 SEPT4O43236 478 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 PRAMEF11O60813 436 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 ADAMTS4O75173 837 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 EOMESO95936 686 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 HMBSP08397 361 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 SERPINF2P08697 491 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 STC1P52823 247 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 TXNL4AP83876 142 aaKnown RBP16.39■□□□□ 0.21
HOXD3-201ENST00000249440 APOFQ13790 326 aa16.39■□□□□ 0.21
HOXD3-201ENST00000249440 GALNT3Q14435 633 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms