RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 FEM1CQ96JP0 617 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 NSUN5Q96P11 429 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 HIPK3Q9H422 1215 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 VTI1BQ9UEU0 232 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 GOLGA8CPA6NN73 597 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 NPHS1O60500 1241 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 RPP40O75818 363 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 STC2O76061 302 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 HLA-DPA1P20036 260 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 POLD2P49005 469 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ELAVL2Q12926 359 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PDAP1Q13442 181 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ZRSR2Q15696 482 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 MRNIPQ6NTE8 343 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PTGR2Q8N8N7 351 aaPredicted RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 BRSK1Q8TDC3 778 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 CDKN2AIPNLQ96HQ2 116 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF184Q99676 751 aaPredicted RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 SCUBE2Q9NQ36 999 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 SEPT3Q9UH03 358 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ADAMTS6Q9UKP5 1117 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 TRIM17Q9Y577 477 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 MYO7AQ13402 2215 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 RBP1P09455 135 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 UBTFL6P0CB48 400 aaPredicted RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 XRCC1P18887 633 aaPredicted RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 DPP6P42658 865 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 MAGEA10P43363 369 aaPredicted RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF177Q13360 481 aaPredicted RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 OR4D1Q15615 310 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 USP41Q3LFD5 358 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 LCA5Q86VQ0 697 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 MDGA1Q8NFP4 955 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF296Q8WUU4 475 aaPredicted RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 SLC45A3Q96JT2 553 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 SLC22A12Q96S37 553 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 SARS2Q9NP81 518 aaKnown RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 PHF24Q9UPV7 400 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 RHOBTB1O94844 696 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 NDST3O95803 873 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 TIAL1Q01085 375 aaKnown RBP eCLIP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 ACAP2Q15057 778 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 BBS5Q8N3I7 341 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 CARNMT1Q8N4J0 409 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 TADA1Q96BN2 335 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 CNDP1Q96KN2 507 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 CLSTN3Q9BQT9 956 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 ZBTB26Q9HCK0 441 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 GALPQ9UBC7 116 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 TPD52L2O43399 206 aaKnown RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 COL6A1P12109 1028 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 PEX2P28328 305 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 TWF1Q12792 350 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 LRRC43Q8N309 656 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 PAF1Q8N7H5 531 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 CEP70Q8NHQ1 597 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 ESAMQ96AP7 390 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 KCNA7Q96RP8 456 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 GSTO2Q9H4Y5 243 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 TRPM5Q9NZQ8 1165 aa15.75■□□□□ 0.11
LRFN1-201ENST00000248668 AGO1Q9UL18 857 aaKnown RBP15.75■□□□□ 0.11
LRFN1-201ENST00000248668 H3BNC9 293 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 OR1I1O60431 355 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 GPC4O75487 556 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 GFAPP14136 432 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 HMGA1P17096 107 aaKnown RBP15.74■□□□□ 0.11
LRFN1-201ENST00000248668 MTTPP55157 894 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 MRPS22P82650 360 aaKnown RBP15.74■□□□□ 0.11
LRFN1-201ENST00000248668 AGKQ53H12 422 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 FAM45BPQ6NSW5 357 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 PAQR3Q6TCH7 311 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 FAM45AQ8TCE6 357 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 HHIPL1Q96JK4 782 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 MRPL9Q9BYD2 267 aaKnown RBP15.74■□□□□ 0.11
LRFN1-201ENST00000248668 MAGEH1Q9H213 219 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 WDR41Q9HAD4 459 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 SLCO1B7G3V0H7 640 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 C1RP00736 705 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 MZF1P28698 734 aaPredicted RBP15.74■□□□□ 0.11
LRFN1-201ENST00000248668 CDH4P55283 916 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 TRIP10Q15642 601 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 ISLR2Q6UXK2 745 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 BNC2Q6ZN30 1099 aaPredicted RBP15.74■□□□□ 0.11
LRFN1-201ENST00000248668 DHDDSQ86SQ9 333 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 RP9Q8TA86 221 aaKnown RBP15.74■□□□□ 0.11
LRFN1-201ENST00000248668 PLK2Q9NYY3 685 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 ADA2Q9NZK5 511 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 TRAF6Q9Y4K3 522 aa15.74■□□□□ 0.11
LRFN1-201ENST00000248668 TRPC5OSA6NMA1 111 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 INSIG1O15503 277 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 SRP72O76094 671 aaKnown RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 CD1DP15813 335 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 FOXA1P55317 472 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 DNAJB13P59910 316 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 CDC16Q13042 620 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 ATXN7L2Q5T6C5 722 aaPredicted RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 OR52E8Q6IFG1 317 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 MGME1Q9BQP7 344 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms