RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PCDH20Q8N6Y1 951 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 PTGR2Q8N8N7 351 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 SEPT5Q99719 369 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 TSEN34Q9BSV6 310 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 PAPOLBQ9NRJ5 636 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 CCDC167Q9P0B6 97 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 CD300AQ9UGN4 299 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 SLC27A5Q9Y2P5 690 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 MTF2Q9Y483 593 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 TLR5O60602 858 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 ALDH2P05091 517 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 CDH4P55283 916 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 RHDQ02161 417 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 PRMT9Q6P2P2 845 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 FBXL19Q6PCT2 694 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 AFTPHQ6ULP2 937 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 CYHR1Q6ZMK1 362 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 LILRA2Q8N149 483 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 RNF148Q8N7C7 305 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 TMEM102Q8N9M5 508 aaPredicted RBP21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 OR52K2Q8NGK3 314 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 KIAA1191Q96A73 305 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 CDKN2AIPNLQ96HQ2 116 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 KLHL32Q96NJ5 620 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 PSKH2Q96QS6 385 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 ATOH8Q96SQ7 321 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 PKP2Q99959 881 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 DERL2Q9GZP9 239 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 EPB41L1Q9H4G0 881 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 TMEM181Q9P2C4 612 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 VPS9D1Q9Y2B5 631 aa21.95■■□□□ 1.1
SMARCD2-201ENST00000225742 AZIN1O14977 448 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 PABPC4LP0CB38 370 aaKnown RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 GPX3P22352 226 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 HOXD9P28356 352 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 MSX2P35548 267 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 ZNF140P52738 457 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 ARPP19P56211 112 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 GALNT3Q14435 633 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SEMA3AQ14563 771 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 TLR1Q15399 786 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 KANK2Q63ZY3 851 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 RPS27LQ71UM5 84 aaKnown RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SLC43A3Q8NBI5 491 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 STAG3L4Q8TBR4 150 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 GPR62Q9BZJ7 368 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 PLK2Q9NYY3 685 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 UBA2Q9UBT2 640 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 DNMT3LQ9UJW3 386 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 TMCO1Q9UM00 188 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 NDUFAF1Q9Y375 327 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 TLL2Q9Y6L7 1015 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 C15orf38-AP3S2A0A0A6YYH1 394 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SMIM31A0A1B0GVY4 71 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SLC38A8A6NNN8 435 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 ENO4A6NNW6 628 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 KDELR3O43731 214 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 KERAO60938 352 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SOAT2O75908 522 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 CDK14O94921 469 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 VNN2O95498 520 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 STAMBPO95630 424 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 HSPA8P11142 646 aaKnown RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SLC11A2P49281 568 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 TAF1AQ15573 450 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 OR4D1Q15615 310 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 CLEC6AQ6EIG7 209 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 PAOXQ6QHF9 649 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 ARPINQ7Z6K5 226 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 OR13C4Q8NGS5 318 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 ZNF483Q8TF39 744 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 CINPQ9BW66 212 aaPredicted RBP21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 CCSER2Q9H7U1 834 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 TAS2R13Q9NYV9 303 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 AP4S1Q9Y587 144 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SLC4A7Q9Y6M7 1214 aa21.94■■□□□ 1.1
SMARCD2-201ENST00000225742 SRCAPQ6ZRS2 3230 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 LCHNA4D1U4 455 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 MTHFD2P13995 350 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 SH3BP2P78314 561 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 ROR2Q01974 943 aaKnown RBP21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 RAD51Q06609 339 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 SPATS1Q496A3 300 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 RNF19BQ6ZMZ0 732 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 EFL1Q7Z2Z2 1120 aaKnown RBP21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 AHI1Q8N157 1196 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 OVCA2Q8WZ82 227 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 NCSTNQ92542 709 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 MYEOVQ96EZ4 313 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 HOPXQ9BPY8 73 aaPredicted RBP21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 EFHD1Q9BUP0 239 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 SPATA16Q9BXB7 569 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 AKTIPQ9H8T0 292 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 MID1IP1Q9NPA3 183 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 MARCH5Q9NX47 278 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 PCDHB7Q9Y5E2 793 aa21.93■■□□□ 1.1
SMARCD2-201ENST00000225742 TCRBV3S1A0A5B6 114 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 PFDN6O15212 129 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 CD9P21926 228 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 SLC7A1P30825 629 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms