RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 MSANTD2Q6P1R3 559 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 RBM44Q6ZP01 1051 aaKnown RBP14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 CDYL2Q8N8U2 506 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 METTL6Q8TCB7 284 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 GPR21Q99679 349 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 KCTD14Q9BQ13 255 aaPredicted RBP14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 MARCH4Q9P2E8 410 aaPredicted RBP14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 PFDN1O60925 122 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 ALOX15P16050 662 aaPredicted RBP14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 IMPDH1P20839 514 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 IL2P60568 153 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 ADAM17P78536 824 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 MFSD1Q9H3U5 465 aa14.95□□□□□ -0.02
UBE2D4-201ENST00000222402 CLASP2O75122 1294 aaKnown RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 E2F6O75461 281 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 FESP07332 822 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 RGS4P49798 205 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 INHBEP58166 350 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 TSTA3Q13630 321 aaPredicted RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 TSNQ15631 228 aaKnown RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 IFNL1Q8IU54 200 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 GATA6Q92908 595 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 FUBP3Q96I24 572 aaKnown RBP eCLIP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 CYP2S1Q96SQ9 504 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 CCSER2Q9H7U1 834 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 DNMT3LQ9UJW3 386 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 PRKCZQ05513 592 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 AASDHQ4L235 1098 aaPredicted RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 AARS2Q5JTZ9 985 aaKnown RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 KBTBD6Q86V97 674 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 CLEC4FQ8N1N0 589 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 OR56A4Q8NGH8 313 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 IMP4Q96G21 291 aaKnown RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 RMND5BQ96G75 393 aaPredicted RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 CLPBQ9H078 707 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 SCML2Q9UQR0 700 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 CCDC154A6NI56 674 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 MBL2P11226 248 aaPredicted RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 KCNA5P22460 613 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 KCNQ1P51787 676 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 ATP6AP1LQ52LC2 224 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 PGM2L1Q6PCE3 622 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 BRSK1Q8TDC3 778 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 ABTB1Q969K4 478 aaPredicted RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 IGSF8Q969P0 613 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 ZFRQ96KR1 1074 aaKnown RBP14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 CCDC138Q96M89 665 aa14.94□□□□□ -0.02
UBE2D4-201ENST00000222402 SMIM31A0A1B0GVY4 71 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 NPEPPSL1A6NEC2 478 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 A8MX80 341 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 HOXD10P28358 340 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 RPS24P62847 133 aaKnown RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 MS4A2Q01362 244 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 SATB1Q01826 763 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 ELAVL2Q12926 359 aaKnown RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 TRIM32Q13049 653 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 AFTPHQ6ULP2 937 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 SPPL2BQ8TCT7 592 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 ANKRD49Q8WVL7 239 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 ACOX2Q99424 681 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 RTP3Q9BQQ7 232 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 THUMPD3Q9BV44 507 aaKnown RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 TM6SF2Q9BZW4 377 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 WWOXQ9NZC7 414 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 CRLS1Q9UJA2 301 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 AGO1Q9UL18 857 aaKnown RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 GABRQQ9UN88 632 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 OR6C75A6NL08 312 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 GNA12Q03113 381 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 OTUD3Q5T2D3 398 aaPredicted RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 PRMT9Q6P2P2 845 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 PAQR3Q6TCH7 311 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 SPPL2CQ8IUH8 684 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 TTC9BQ8N6N2 239 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 TRIB2Q92519 343 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 HBEGFQ99075 208 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 AKTIPQ9H8T0 292 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 MRM3Q9HC36 420 aaKnown RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 FAM149AA5PLN7 773 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 LPOP22079 712 aaPredicted RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 MC4RP32245 332 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 CLCQ05315 142 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 TMED1Q13445 227 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 CNPY1Q3B7I2 92 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 TIGD2Q4W5G0 525 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 UGT3A1Q6NUS8 523 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 LINGO4Q6UY18 593 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 ZNF483Q8TF39 744 aaPredicted RBP14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 C17orf80Q9BSJ5 609 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 COQ10BQ9H8M1 238 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 CACNA2D2Q9NY47 1150 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 ZMYM5Q9UJ78 669 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 RAB26Q9ULW5 256 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 MYRFQ9Y2G1 1151 aa14.93□□□□□ -0.02
UBE2D4-201ENST00000222402 DHRS12A0PJE2 317 aa14.92□□□□□ -0.02
UBE2D4-201ENST00000222402 BCAS2O75934 225 aaPredicted RBP14.92□□□□□ -0.02
UBE2D4-201ENST00000222402 LEPRP48357 1165 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms