RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 HLA-DPA1P20036 260 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 GATMP50440 423 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 TWIST2Q8WVJ9 160 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 VPS33AQ96AX1 596 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 ZFP37Q9Y6Q3 630 aaPredicted RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 MYOCOSA0A1B0GUC4 107 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 E7ENX8 843 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 ITGALP20701 1170 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 BOP1Q14137 746 aaKnown RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 PAQR3Q6TCH7 311 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 STK32CQ86UX6 486 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 NRBF2Q96F24 287 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 RMND5BQ96G75 393 aaPredicted RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 GJD2Q9UKL4 321 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 ADAMTS6Q9UKP5 1117 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 LRRC14BA6NHZ5 514 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 TBL1XO60907 577 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 FESP07332 822 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 CCND3P30281 292 aaPredicted RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 AARS2Q5JTZ9 985 aaKnown RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 UGT3A1Q6NUS8 523 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 SATL1Q86VE3 508 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 RALGPS2Q86X27 583 aaPredicted RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 SHKBP1Q8TBC3 707 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 DLG3Q92796 817 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 NSMCE2Q96MF7 247 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 PPM1MQ96MI6 270 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 KCNA7Q96RP8 456 aa13.58□□□□□ -0.24
RAB3D-201ENST00000222120 CHCHD3Q9NX63 227 aaKnown RBP13.58□□□□□ -0.24
RAB3D-201ENST00000222120 KNL1Q8NG31 2342 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 SEC22BO75396 215 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 C1RP00736 705 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 CYBBP04839 570 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 MAGEA6P43360 314 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 ARSDP51689 593 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 NEDD8Q15843 81 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 SLC5A9Q2M3M2 681 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 PGS1Q32NB8 556 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 LIN52Q52LA3 116 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 REP15Q6BDI9 236 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 KIAA0408Q6ZU52 694 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 FBXO30Q8TB52 745 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 SUSD3Q96L08 255 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 TRAPPC9Q96Q05 1148 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 PTGDR2Q9Y5Y4 395 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 LRRC37AA6NMS7 1700 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 G3V2L1 256 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 MAFKO60675 156 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 RPP40O75818 363 aaKnown RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 RPLP2P05387 115 aaKnown RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 KPNA1P52294 538 aaPredicted RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 GNA12Q03113 381 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 HSPA14Q0VDF9 509 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 BFSP2Q13515 415 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 POM121L1PQ3SYA9 428 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 LPCAT2Q7L5N7 544 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 DET1Q7L5Y6 550 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 LINC01465Q8N7H1 131 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 STYXQ8WUJ0 223 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 CCDC28BQ9BUN5 200 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 FKBPLQ9UIM3 349 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 SNX5Q9Y5X3 404 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 POLR2AP24928 1970 aaKnown RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 SCN1AP35498 2009 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 A0A0D9SEW6 157 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 RBM47A0AV96 593 aaKnown RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 GABRDO14764 452 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 NDST3O95803 873 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 MAP4P27816 1152 aaKnown RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 LPIN1Q14693 890 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 ACAP2Q15057 778 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 IL23RQ5VWK5 629 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 EFL1Q7Z2Z2 1120 aaKnown RBP13.57□□□□□ -0.24
RAB3D-201ENST00000222120 IFNL1Q8IU54 200 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 CPNE9Q8IYJ1 553 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 CDK15Q96Q40 435 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 FAM192AQ9GZU8 254 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 MKS1Q9NXB0 559 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 LIMD1Q9UGP4 676 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 RAI2Q9Y5P3 530 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 ACTL7AQ9Y615 435 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
RAB3D-201ENST00000222120 GON4LQ3T8J9 2241 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 C1orf232A0A0U1RR37 186 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 NCK1P16333 377 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 CORO1AP31146 461 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 TUFMP49411 452 aaKnown RBP13.56□□□□□ -0.24
RAB3D-201ENST00000222120 SP3Q02447 781 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 TRAF2Q12933 501 aa13.56□□□□□ -0.24
RAB3D-201ENST00000222120 MS4A13Q5J8X5 152 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms