RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SLC22A9Q8IVM8 553 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 UBXN10Q96LJ8 280 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 PKP2Q99959 881 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 MRPL1Q9BYD6 325 aaKnown RBP22.21■■□□□ 1.15
CCDC9-201ENST00000221922 UNKQ9C0B0 810 aaKnown RBP22.21■■□□□ 1.15
CCDC9-201ENST00000221922 DNMT3LQ9UJW3 386 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 AP4B1Q9Y6B7 739 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 IPO13O94829 963 aaKnown RBP22.21■■□□□ 1.15
CCDC9-201ENST00000221922 S1PR4O95977 384 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 CCDC166P0CW27 439 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 HSPA13P48723 471 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 FAM45BPQ6NSW5 357 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 TMEM102Q8N9M5 508 aaPredicted RBP22.21■■□□□ 1.15
CCDC9-201ENST00000221922 FAM45AQ8TCE6 357 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 ASB9Q96DX5 294 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 SGF29Q96ES7 293 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 TMA16Q96EY4 203 aaKnown RBP22.21■■□□□ 1.15
CCDC9-201ENST00000221922 MEAF6Q9HAF1 191 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 PLK2Q9NYY3 685 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 CNOT11Q9UKZ1 510 aaKnown RBP22.21■■□□□ 1.15
CCDC9-201ENST00000221922 PCDHGA7Q9Y5G6 932 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 ATP5C1P36542 298 aaKnown RBP22.2■■□□□ 1.14
CCDC9-201ENST00000221922 RPL5P46777 297 aaKnown RBP22.2■■□□□ 1.14
CCDC9-201ENST00000221922 ARSDP51689 593 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 PTK2BQ14289 1009 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 LGI2Q8N0V4 545 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 AHI1Q8N157 1196 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 PRICKLE1Q96MT3 831 aaPredicted RBP22.2■■□□□ 1.14
CCDC9-201ENST00000221922 PDFQ9HBH1 243 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 MRPL40Q9NQ50 206 aaKnown RBP22.2■■□□□ 1.14
CCDC9-201ENST00000221922 GTSE1Q9NYZ3 720 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.2■■□□□ 1.145e-7■■■□□ 14.6
CCDC9-201ENST00000221922 SARDHQ9UL12 918 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 RIMKLBQ9ULI2 386 aa22.2■■□□□ 1.14
CCDC9-201ENST00000221922 TTC24A2A3L6 582 aaPredicted RBP22.19■■□□□ 1.14
CCDC9-201ENST00000221922 HNRNPLP14866 589 aaKnown RBP eCLIP22.19■■□□□ 1.14
CCDC9-201ENST00000221922 OR1D2P34982 312 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 KCNQ1P51787 676 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 SH3BGRP55822 239 aaPredicted RBP22.19■■□□□ 1.14
CCDC9-201ENST00000221922 PSME3P61289 254 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 ALG1LQ6GMV1 187 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 KLHDC10Q6PID8 442 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 GK5Q6ZS86 529 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 RNF135Q8IUD6 432 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 HMGCLL1Q8TB92 370 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 TOP1MTQ969P6 601 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 MYEOVQ96EZ4 313 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 VN1R3Q9BXE9 311 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 MAGEH1Q9H213 219 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 SUCOQ9UBS9 1254 aaKnown RBP22.19■■□□□ 1.14
CCDC9-201ENST00000221922 NEMP2A6NFY4 417 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 A8MT66 165 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 ACSL4O60488 711 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 TFAP2AP05549 437 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 SERPINF2P08697 491 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 CREB5Q02930 508 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 GALNT1Q10472 559 aaPredicted RBP22.19■■□□□ 1.14
CCDC9-201ENST00000221922 STX5Q13190 355 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 SQLEQ14534 574 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 MAPRE2Q15555 327 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 GPR150Q8NGU9 434 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 CWH43Q9H720 699 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 ZNF696Q9H7X3 374 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 HSFX1Q9UBD0 423 aa22.19■■□□□ 1.14
CCDC9-201ENST00000221922 WISP3O95389 354 aaPredicted RBP22.18■■□□□ 1.14
CCDC9-201ENST00000221922 GLP2RO95838 553 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 PENKP01210 267 aaPredicted RBP22.18■■□□□ 1.14
CCDC9-201ENST00000221922 KCNA5P22460 613 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 TRIM25Q14258 630 aaKnown RBP22.18■■□□□ 1.14
CCDC9-201ENST00000221922 MRNIPQ6NTE8 343 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 BRSK1Q8TDC3 778 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 DGCR14Q96DF8 476 aaKnown RBP22.18■■□□□ 1.14
CCDC9-201ENST00000221922 IGSF21Q96ID5 467 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 EPS15L1Q9UBC2 864 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 AFF4Q9UHB7 1163 aaKnown RBP22.18■■□□□ 1.14
CCDC9-201ENST00000221922 ANKRD33BA6NCL7 494 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 RNASEH2AO75792 299 aaKnown RBP22.18■■□□□ 1.14
CCDC9-201ENST00000221922 PGM3O95394 542 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 C8BP07358 591 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 SLC11A2P49281 568 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 INHBCP55103 352 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 LRP8Q14114 963 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.18■■□□□ 1.14
CCDC9-201ENST00000221922 DEFB128Q7Z7B8 93 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 SPATA24Q86W54 205 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 BLOC1S5Q8TDH9 187 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 TRMOQ9BU70 441 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 ADA2Q9NZK5 511 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 PCDHGB4Q9UN71 923 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 LZTS1Q9Y250 596 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 PCDHGB5Q9Y5G0 923 aa22.18■■□□□ 1.14
CCDC9-201ENST00000221922 COL4A6Q14031 1691 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 ZNF840PA6NDX5 716 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 RPP40O75818 363 aaKnown RBP22.17■■□□□ 1.14
CCDC9-201ENST00000221922 TNFAIP8O95379 198 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 CLPTM1O96005 669 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 RPL17P18621 184 aaKnown RBP22.17■■□□□ 1.14
CCDC9-201ENST00000221922 ATN1P54259 1190 aaPredicted RBP22.17■■□□□ 1.14
CCDC9-201ENST00000221922 MYBPC1Q00872 1141 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 GNA12Q03113 381 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms