RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 TMIEQ8NEW7 156 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 LRRC4CQ9HCJ2 640 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 SLC30A4O14863 429 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 CAMK2GQ13555 558 aaPredicted RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 NAE1Q13564 534 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 HYIQ5T013 277 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 TMEM179Q6ZVK1 233 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 SPATA2LQ8IUW3 424 aaPredicted RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 CHCHD4Q8N4Q1 142 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 WNK1Q9H4A3 2382 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 HEATR5AQ86XA9 2040 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 GSTT2P0CG29 244 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 GSTT2BP0CG30 244 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 ACADLP28330 430 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 CDH4P55283 916 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 RBM48Q5RL73 367 aaKnown RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 TMEM236Q5W0B7 351 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 POTEHQ6S545 545 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 RAP2CQ9Y3L5 183 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 MYLKQ15746 1914 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 A0A0J9YYE9 177 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 BTN3A1O00481 513 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 HDAC3O15379 428 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 CALCAP01258 141 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 IDH3AP50213 366 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 ZNF81P51508 661 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 SSX6Q7RTT6 188 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 SLITRK4Q8IW52 837 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 CFAP206Q8IYR0 622 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 GANQ9H2C0 597 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 IFT80Q9P2H3 777 aaPredicted RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 SEC14L4Q9UDX3 406 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 FGRP09769 529 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 ALDH3A2P51648 485 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 MAPKAPK3Q16644 382 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 RNF44Q7L0R7 432 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 LINGO2Q7L985 606 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 MRPL57Q9BQC6 102 aaKnown RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 KLHL28Q9NXS3 571 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 TAS2R3Q9NYW6 316 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 MAB21L2Q9Y586 359 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 IRF1P10914 325 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 PTPN1P18031 435 aaKnown RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 CACNB3P54284 484 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 SNRPD2P62316 118 aaKnown RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 WDR55Q9H6Y2 383 aaPredicted RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 ATP6AP2A0A1C7CYW4 349 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 TCRBV9S1A1TA0A576 114 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 ATP6AP2O75787 350 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 LRATO95237 230 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 LIPEQ05469 1076 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 SIM2Q14190 667 aaPredicted RBP11.07□□□□□ -0.64
USP31-201ENST00000219689 AP5B1Q2VPB7 878 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 TCEAL5Q5H9L2 206 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 ZCCHC12Q6PEW1 402 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 KAT5Q92993 513 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 AATKQ6ZMQ8 1374 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 LOC100509620A0A075B734 347 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 ELP6Q0PNE2 266 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 RAP1GAP2Q684P5 730 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 OR5J2Q8NH18 312 aa11.07□□□□□ -0.64
USP31-201ENST00000219689 OR10H3O60404 316 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 FTH1P02794 183 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 TSPAN5P62079 268 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 GIT2Q14161 759 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 GALNTL5Q7Z4T8 443 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 ZFYVE16Q7Z3T8 1539 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 PITRM1Q5JRX3 1037 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 C7orf57Q8NEG2 295 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 SLC30A2Q9BRI3 323 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 MRPL42Q9Y6G3 142 aaKnown RBP11.06□□□□□ -0.64
USP31-201ENST00000219689 RP2O75695 350 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 PSMB4P28070 264 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 TOR1AIP1Q5JTV8 583 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 TRIM40Q6P9F5 258 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 ARMC10Q8N2F6 343 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 S100GP29377 79 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 FMO4P31512 558 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 VMACQ2NL98 169 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 PLEKHG6Q3KR16 790 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 ASB18Q6ZVZ8 466 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 LPIN3Q9BQK8 851 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 ANKRA2Q9H9E1 313 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 OIP5O43482 229 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 ITGB3P05106 788 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 CRHR1P34998 444 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 FASTKD3Q14CZ7 662 aaKnown RBP11.06□□□□□ -0.64
USP31-201ENST00000219689 ZNF772Q68DY9 489 aaPredicted RBP11.06□□□□□ -0.64
USP31-201ENST00000219689 UBR7Q8N806 425 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 GALNT11Q8NCW6 608 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 IDI2Q9BXS1 227 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 DDIT4Q9NX09 232 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 GSAPA4D1B5 854 aa11.06□□□□□ -0.64
USP31-201ENST00000219689 SMAD9O15198 467 aaKnown RBP11.06□□□□□ -0.64
USP31-201ENST00000219689 SLC22A3O75751 556 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms