RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Fbxo46Q8BG80 603 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zbtb46Q8BID6 600 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Klhl38Q8BSF5 581 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 E330017A01RikQ8BU47 192 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 NoboxQ8VIH1 527 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tmem98Q91X86 226 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Sf3a3Q9D554 501 aaKnown RBP9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Glipr1l1Q9DAG6 236 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 IL36RNQ9QYY1 156 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tex13aA2AFS9 377 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Armc4B2RY50 1037 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm7714E9Q079 131 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nccrp1G3X9C2 266 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 AF366264G3X9P9 502 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Il6raP22272 460 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Pdcd2P46718 343 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Kpna2P52293 529 aaKnown RBP9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Npy2rP97295 381 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Lingo4Q149C3 593 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slc17a7Q3TXX4 560 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Elavl3Q60900 367 aaKnown RBP9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tbc1d1Q60949 1255 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 MelkQ61846 643 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Msantd1Q8BIL2 278 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Defb22Q8BVC1 179 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm13199Q8C8E0 125 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ccdc63Q8CDV6 558 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gatad2aQ8CHY6 629 aaKnown RBP9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Hacd3Q8K2C9 362 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Masp2Q91WP0 685 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 DdoQ922Z0 341 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ProzQ9CQW3 399 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Q9D5Y0 588 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ten1Q9D7K2 161 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 GmprQ9DCZ1 345 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 PygmQ9WUB3 842 aaKnown RBP9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Lzts3A2AHG0 700 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 SmgcF6VRN1 385 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Anxa8O35640 327 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Syngr1O55100 234 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ldb2O55203 373 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cd4P06332 457 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Crabp2P22935 138 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ErgP81270 486 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ankmy2Q3TPE9 440 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 PfplQ5RKV8 702 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Stkld1Q80YS9 662 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mccc1Q99MR8 717 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tspan11Q9D1D1 253 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ankrd7Q9D504 279 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 DynapQ9D7M5 161 aa9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Rfwd2Q9R1A8 733 aaKnown RBP9.94□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm13119B1ARV5 481 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Hsf3D0VYS2 492 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tsga10ipF7A1F0 157 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm10715J3QP74 227 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm5814J3QP80 125 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Opn1mwO35599 359 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Il27raO70394 623 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 CtslP06797 334 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Alox15P39654 663 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Atp8b1Q148W0 1251 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mat2aQ3THS6 395 aaKnown RBP9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slfn4Q3UV66 602 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Otol1Q4ZJM7 482 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Kctd16Q5DTY9 427 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Arhgef15Q5FWH6 849 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Exoc3l1Q8BI71 739 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Bend7Q8BSV3 434 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Acat2Q8CAY6 397 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 AmotQ8VHG2 1126 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Rrp9Q91WM3 475 aaKnown RBP9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cnbd2Q9D5U8 673 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cacna1hO88427 2365 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vmn1r88E9Q235 316 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Taf4E9QAP7 1042 aaKnown RBP9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm3159K7N760 267 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Bpifa1P97361 278 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dusp2Q05922 318 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Usp30Q3UN04 517 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gpr165Q3V3A3 455 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ScinQ60604 715 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zswim9Q6DI92 447 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Rad54bQ6PFE3 886 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Morc4Q8BMD7 928 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zbtb33Q8BN78 671 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Arhgap25Q8BYW1 648 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gpr153Q8K0Z9 631 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ApofQ91V80 315 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 TmlheQ91ZE0 421 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Aff4Q9ESC8 1160 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Capn15Q9JLG8 1095 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tmem115Q9WUH1 350 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Lilra5D3Z7A9 295 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Vmn2r14E9Q759 848 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Socs5O54928 536 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Akap3O88987 864 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 ChrngP04760 519 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam196aQ3USH1 422 aa9.93□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zbtb2Q3V3W4 514 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 803.9 ms