RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Slc13a2Q9ES88 586 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 WarsP32921 481 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Stat6P52633 837 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Spink5Q148R4 1017 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Brinp3Q499E0 766 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dpp10Q6NXK7 797 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gpr180Q8BPS4 441 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Prl7c1Q9CRB5 251 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trim39Q9ESN2 488 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm4778L7N229 365 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cyp2d34L7N463 504 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cbx5Q61686 191 aaKnown RBP11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc39a4Q78IQ7 660 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gxylt2Q810K9 444 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Arel1Q8CHG5 823 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr1361Q8VFH0 317 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 NamptQ99KQ4 491 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Prelid3bQ9CYY7 195 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mst1rQ62190 1378 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm6509A0A0J9YUV1 481 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm6351K9J7D1 481 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm6356L7N2A7 188 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 CluQ06890 448 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Naa11Q3UX61 218 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Jak3Q62137 1100 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Lemd2Q6DVA0 511 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tmem68Q9D850 329 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc25a19Q9DAM5 318 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ubiad1Q9DC60 336 aa11.95□□□□□ -0.5
Trim56-201ENSMUST00000054384 Epha3P29319 983 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gabrb2P63137 512 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rgs14P97492 547 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zyg11bQ3UFS0 744 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Snx32Q80ZJ7 404 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Chil4Q91Z98 402 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slfn14V9GXG1 899 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pik3cdO35904 1043 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cdh9P70407 786 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dnajb14Q149L6 379 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fbxw8Q8BIA4 598 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tmem220Q8BP07 167 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 GneQ91WG8 722 aaKnown RBP11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Arl10Q9QXJ4 243 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Htatip2Q9Z2G9 242 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm13119B1ARV5 481 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ercc2O08811 760 aaKnown RBP11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zbtb2Q3V3W4 514 aaKnown RBP11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Foxo6Q70KY4 559 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Sumf1Q8R0F3 372 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 LiasQ99M04 373 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ppil6Q9D6D8 278 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 S1pr4Q9Z0L1 386 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm13089A2AGW7 455 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Adora2aQ60613 410 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cdc14bQ6PFY9 485 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Atp6v1g3Q8BMC1 118 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rex1bdQ9CYZ6 169 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cpxm2Q9D2L5 764 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 SgshQ9EQ08 502 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Kcna10B2RQA1 511 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mmp14P53690 582 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trafd1Q3UDK1 580 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rnft2Q3UF64 445 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dnaaf3Q3UYV8 586 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zswim6Q80TB7 1207 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam83eQ80XS7 481 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Plcz1Q8K4D7 647 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vmn1r24Q8R2D6 296 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Apobec3Q99J72 440 aaKnown RBP11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fam136aQ9CR98 138 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rgs1Q9JL25 209 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vmn2r86G5E8Y4 848 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ano7Q14AT5 859 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Nrg1Q6DR99 700 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trnau1apQ80VC6 287 aaKnown RBP11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Angel2Q8K1C0 544 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rell1Q8K2J7 272 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Btbd19S4R1I0 287 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zscan5bB2RTN3 468 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 DgkhD3YXJ0 1156 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm8126E9Q1N7 198 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Azin1O35484 448 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rab23P35288 237 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cdh8P97291 799 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mvb12bQ6KAU4 317 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Psd2Q6P1I6 770 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 4930503B20RikQ80ZP0 234 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Thap3Q8BJ25 218 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 TdrpQ8C5P7 182 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rcor1Q8CFE3 480 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mxra8Q9DBV4 442 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ptpn23Q6PB44 1692 aa11.94□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ism2D3Z6A3 493 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zfp28P10078 825 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Resp18P47939 175 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 St14P56677 855 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Smu1Q3UKJ7 513 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pdcd4Q61823 469 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ccdc184Q8BMK5 191 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc43a1Q8BSM7 564 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms